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Name : CMS_1280 (CMS_1280) Accession : YP_001710016.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Unknown Product : transport protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 1342081 - 1343601 bp Length : 1521 bp Strand : - Note : - DNA sequence : GTGGGCGGCACCCGGGCGGATCCCCGCTCGCTCCCCCTGCACCGCAGCCGCACCGCTGGAGACCCCATGACCACCGCACC GCCCGCCGCATCCGCCGCACCGATCGCCGCTCCCGACGCCCCCGAGGCCCCCGCCGACGTCTCCCGCCGCCGCCGCCGCG TCCTCACCGCGTCGTTCATCGGCACCACCGTCGAGTACTACGACTTCTACCTCTACGCCACGGCGTCCGCGCTCGTGTTC GGCAGCCAGTTCTTCCCCAACCAGACGCCCGCGGTCGCCCTGCTGTCGTCGTTCGCCGCGTACGGGGTCGGGTTCCTCGC CAGGCCCATCGGCGGGATCGTCGCCGGGCACCTCGGCGACCGCATCGGCCGCAAGCGCTTGCTCGTCTACTCGCTCGTGC TCATGGGGATCGCGTCGACCCTCATCGGCGTCCTGCCGACCTACGCGACCATCGGCCTCGCGAGCGTCGTCGGCCTCGTG CTCCTGCGGCTCGTGCAGGGCATCGCGGCGGGCGCCGAGTGGGGCGGATCCGCGCTGCTCTCCGTCGAGCACGCCCCCGC CCACCGCCGGGGCCTCTTCGGCGCGTTCACGCAGATGGGTTCCGCGGGCGGCATGCTCCTCGCGACCGCCGTCTTCGCCG CGACGCGCTTCACGCTCGGCGAGGAGCAGTTCCTCGCCTGGGGCTGGCGCCTGCCGTTCCTCCTCAGCGCCGTGCTCGTG GGCGTCGGCCTCGTGATCCGCCTGCGCGTGGAGGACGCCGCCGAGTTCACGGAGATCACGGCGGCCGGCGATGTCGAGCG CTTCCCGCTCGGCGTCGTGCTCCGCAGGCACCCGCACGCCGTGCTCATCACCGCGGGCCTCCGCCTCGTGCAGCCCGCGC TCTACTCGATCCTCACCGTCTACACGCTCTCCTACCTCAGCGAGAAGCGCGGTGACTCGGGCAGCGCGCTCACGGCGGTG CTCATCGTGTCGGCGCTGAGCGTGCTGACCACTCCCCTCTGGGGCTGGATCTCCGACCGCGTCGGCCGCCGCCGCCTCAC CATCGCGAGCACGGCCGGCATCGGGATCCTCATCTGGCCGTTCTTCGCGTTCCTCGACTCCGGCCCGCTGCTGCTCCTGC CGCTCGTCTTCGCGCTCGGCATGAACGTCTTCCACGACTCCATCTACGGGCCGCAGGCCGCGTGGTTCGCGGAGCAGTTC CCGACCGGCGTCCGTTACAGCGGCGTCTCGCTCGGCTATCAGGTCGGCAGCATCTTCTCCGTCGGCCTCACGCCGCTGCT CGCGGTGCTGTTCCTGCAGTGGGGCGGCGGATCCCCGTGGATCCTCTGCGCCTACATCGGGCTGTACGCGGTGCTGACGA TCGCGGCGGCGCTCGCGGCGAAGGACCCGGCACGGGAGGCGATCGCGGCCCGACGGGCGGCGGCGGCGGACGACGAGCGG GACGCCGTGCACCCGGCGGTCGCGGTGGCCGGTGCCGCGGGGGCGGGCGGCCGGGAGCGCGAGCGCGCGACCGTCCGGTA G Protein sequence : MGGTRADPRSLPLHRSRTAGDPMTTAPPAASAAPIAAPDAPEAPADVSRRRRRVLTASFIGTTVEYYDFYLYATASALVF GSQFFPNQTPAVALLSSFAAYGVGFLARPIGGIVAGHLGDRIGRKRLLVYSLVLMGIASTLIGVLPTYATIGLASVVGLV LLRLVQGIAAGAEWGGSALLSVEHAPAHRRGLFGAFTQMGSAGGMLLATAVFAATRFTLGEEQFLAWGWRLPFLLSAVLV GVGLVIRLRVEDAAEFTEITAAGDVERFPLGVVLRRHPHAVLITAGLRLVQPALYSILTVYTLSYLSEKRGDSGSALTAV LIVSALSVLTTPLWGWISDRVGRRRLTIASTAGIGILIWPFFAFLDSGPLLLLPLVFALGMNVFHDSIYGPQAAWFAEQF PTGVRYSGVSLGYQVGSIFSVGLTPLLAVLFLQWGGGSPWILCAYIGLYAVLTIAAALAAKDPAREAIAARRAAAADDER DAVHPAVAVAGAAGAGGRERERATVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-58 | 42 |
