Gene Information

Name : YPK_1124 (YPK_1124)
Accession : YP_001719875.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1263226 - 1263438 bp
Length : 213 bp
Strand : +
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ypm:YP_2460 cold shock protein

DNA sequence :
ATGTCTAATAAAATGACTGGTTTGGTAAAATGGTTTGATGCTGGTAAAGGTTTTGGTTTTATTTCTCCTGCAGACGGCAG
CAAAGATGTATTTGTACATTTCTCTGCAATCCAGGGTAATGACTACAAAACTCTTGATGAAGGCCAGAACGTTGAGTTCA
GCATCGAGCAAGGCCAAAAAGGCCCTTCAGCTGTAAACGTTGTAGCACTGTAA

Protein sequence :
MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPSAVNVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-21 76
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-09 48