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Name : YPK_1501 (YPK_1501) Accession : YP_001720247.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1661522 - 1663492 bp Length : 1971 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: ypi:YpsIP31758_1392 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCTGAAATTGGCAGTTTTTTATTATGTTTGGCGTTGGCGATTTCACTGCTGCTGAGTCTGTATCCACAATGGGG AGCCGCGCGTCAGGATGCCCGTATGATGGCGGTTGGCAGGCCACTGACTTATGGCATGTTTGCCGCGATCACGTTGTCAT TTATCTGTCTGATATATGCATTTGTGGTAAATGATTTTACCGTCTCCTATGTCGCGGCGAATTCCAACTCATATTTGCCG ATTTATTACCGTATTGCCGCGAGTTGGGGAGCGCACGAAGGCTCCTTATTATTATGGGTATTGCTGCTCAGTTGTTGGTC ATTGGCGGTAGCGCTGTTTAGCCGTTCGATGCCAGAGGATGCGGTGGCGCGGGTGTTATCCGTGCTGGGAATGATTACCG GCGGTTTTCTGCTATTTATTATTCTGACGTCTAACCCGTTCTCTCGCACATTACCTGATTTTCCTATTGATGGCCGCGAT CTGAACCCGCTACTACAAGATGTTGGGTTGATTTTCCATCCCCCGCTGCTCTACATGGGGTATGTCGGTTTCTCCGTCGC GTTTGCTTTTGCAATTGCATCATTAATGGCCGGTAGGCTCGACAGTGCCTGGGCGCGTTGGTCACGTCCATGGACTCAGG CCGCATGGGTTTTCCTAACGCTTGGCATCGTACTTGGCTCAGCGTGGGCTTATTATGAATTGGGGTGGGGCGGCTGGTGG TTCTGGGACCCGGTCGAAAATGCCTCCTTTATGCCGTGGCTGGCAGGTACCGCACTGATTCACTCACTGGCTGTCACGGA GAAGCGCGGTACTTTCAAAGCGTGGACGGTATTGTTGGCGATCACCGCGTTCTCCTTGTGTTTGATGGGGACATTCTTAG TCCGCTCAGGCGTGCTGGTTTCGGTGCACTCCTTTGCCTCTGATCCGGCCCGTGGCATGTTTATTCTGGCCTATCTGGTG ATTGTGATTGGCGGTTCCCTGCTGCTGTATGCGGTAAAAGGCGCGCAGGTGCGCAGCCGGACTCAGCATGAAGTCTTTTC CCGCGAGACTTTCCTGCTCGGCAACAATGTGTTGCTTATTGCCGCAATGCTCGTGGTGTTGCTGGGAACATTACTGCCAC TGGTTCACAAACAGTTGGGATTGGGCAGTATCTCCATTGGTGAACCGTTCTTTAATACGATGTTCACTTGGTTAATGGCT CCGATGGCATTGCTCATGGGGATAGGGCCGCTCGTGCGTTGGCGTCGTGATGAACCGAGCAAACTGTGGAAGCGGTTGAG TGTGGCTCTGGTGGTCACTCTGCTGTTATCGATATCCGTACCGTGGCTGCTGCAAGATAGTGTTGCCGGTATGACGGTCG TCGGGTTGATGATGGCCATTTGGGTGATCATCCTGACATTAATGGAATTGCACGAACGGGCCACCCATCGTTATGGCTTC TGGCGTGGGTTGACTCACCTTTCCCGTAGCCACTGGGGCATGGTGTTGGGGCATCTCGGGGTGGCGGTTACGGTAATTGG GATTGCGTTTAGCCAGAATTACAGTGTCGAACGCGATGTGCGCATGAAGGCCGGTGATAGTATCGATATCCATGATTATC ACTTCACTTTTCGCGATGTCCACGATATCAAAGGGCCTAACTATACCGGCGGCGTTGGCATTATTGATGTCACCCGTAAT GGTAAATTGGAGGCCACATTACATGCAGAAAAACGCTATTACAGTGTCGCCCGCTCAATGATGACTGAAGCAGCCATTGA TGGGGGGCTGACCCGCGATCTTTATGCCGCCTTGGGTGAAGAGCTGGGCGATGGCTCATGGGCGGTCCGCTTGTATTACA AACCTTTTGTGCGTTGGATATGGTTTGGCGGGATCTTTATGGCCGTCGGCGGCATCTTCTGTATGCTCGATCCGCGCTAT CGGATGAGTAAAAAGCTAAAACGCGGTGCGATACCGGAGGCAGAGTCATGA Protein sequence : MIPEIGSFLLCLALAISLLLSLYPQWGAARQDARMMAVGRPLTYGMFAAITLSFICLIYAFVVNDFTVSYVAANSNSYLP IYYRIAASWGAHEGSLLLWVLLLSCWSLAVALFSRSMPEDAVARVLSVLGMITGGFLLFIILTSNPFSRTLPDFPIDGRD LNPLLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFLVRSGVLVSVHSFASDPARGMFILAYLV IVIGGSLLLYAVKGAQVRSRTQHEVFSRETFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMA PMALLMGIGPLVRWRRDEPSKLWKRLSVALVVTLLLSISVPWLLQDSVAGMTVVGLMMAIWVIILTLMELHERATHRYGF WRGLTHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRMKAGDSIDIHDYHFTFRDVHDIKGPNYTGGVGIIDVTRN GKLEATLHAEKRYYSVARSMMTEAAIDGGLTRDLYAALGEELGDGSWAVRLYYKPFVRWIWFGGIFMAVGGIFCMLDPRY RMSKKLKRGAIPEAES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-180 | 72 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-131 | 53 |
