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Name : YPK_2004 (YPK_2004) Accession : YP_001720744.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2230676 - 2232823 bp Length : 2148 bp Strand : - Note : KEGG: ypi:YpsIP31758_1891 toxin ABC transporter, ATP-binding/permease protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase DNA sequence : ATGGAAAATCATGTTCATTCCGCGCTGATATGTGCATCCAGACTGATTCGGTTGGCCGGGTTAAATCCAATGGATATCGA GACATTTAGCCAAAAGGTCGCCATAGACACCTCAGTAAAAACAACGCTAGCGTCTCTTCAGCGTTATATCGTTCAATTTT CACAAACAGCTTCTGTCCGTTTTAAAATACGTAAGCAAGCATTGGAAAAAATAAGGCAGGAGCAGTTACCGCTGGCATTT CGTGACCGTCAGGGGAATTTTATCTTGCTGGCGCGGATGAATGAACAACAAGTGTTATTACAGTACGCTGATGATAAAAA ACCACAAATGTTAAGTTATCAATCACTTGCTGACATGTGGGGTGGAATGATCTTATGCTGTAGTCATTCGCGCTTTGATA TTCGCTGGTTTATCCCGCCACTACGTCGCCATCGTAAGCCATTAATGCAAGTCCTATTGTTATCATTATTGCTGCAATTC CTAGCGTTGATCTCCCCTCTCTTTTTTCAAGTTATCATGGACAAAGTACTCGTTCATCATGCATTAACCACACTGGAAGT GCTAATCTTCATCTTAGTCATTGTCGGTGTGTATGAGGTTATATTAAAAGGCTTACGAGAATATATTTTCACGCATACGA CAACACGAGTGGATATATTATTAGGCGGGAAGTTGTTTCAACATTTAATCAGGTTGCCGTTAAGTTACTTTAAACAACGT CATGTCGGTAATATTGTTGCCAGAGTCCGTGAGTTAGATAATATCCGTGATTTCATCACGGGTTCGGCCCTGACATTATG TGTTGATGTGGTTTTTACCCTCGTGTTGTTTATTGTTATGTGGTGTATATCCCCGTTATTAACCTTAATAATACTGAGCA CGTTGCCTTTTTATCTGTTATTGGCCGTGATGACCACTCGGCCGTTGCAAAAAAAAGTAGAAGCTCTCTGTGGTTTTGCC GCGCAAAACGGCGCGTTTTTGACTGAAACGGTGTCTGGGGTGGAAACCGTAAAAAGTTTGGCGCTGGAGCCACGGATGCG CCAGCGCTGGGAAAGCCAAACTCGTGATTTTGCTCAGGCTAATTTTCAGGTACAAAATTTGCAAAATCTCAGTAGCCAAG CGGCTCAACTCTTGCAAAAGGTGGCTGGCGCACTGGTGATCGTGATAGGTGCGTATCACGTTATGTCTGTACAGCTCAGT ATTGGTCAGTTGATTGCATTTAATATGTTGGCACTACAGGCATTAATGCCGATGAGTAAACTGGTTGATTTATGGCAGCA GAGCATCCGTGCTCAGGTTGGGCTGAAATTAATATCAGATATTCTAAGCTTGCCGGTTGAACCGGAGGCAGATCCGGCGG CCCCGCACCCTGCGATTAGCGGCAATATCCTACTAAAAAATGTGGCCTTCCGTTATCGCCCCGATCTTGATCCTGTCTTA CATGATTTAAACTTATCTATCTGCGCGGGTGAAAATATAGGGTTGGTGGGGCCGTCAGGATCGGGGAAAAGCACCGTGGC CCGGTTATTACAACGGCTCTATAACACCGAACAAGGGGTCATTACGATAGATGGTTATCCGATCAACCATTTATCACCAG AATATTTACGGCGACAAGTGGGGGTGGTGATGCAGGAAAGCTATCTGTTTAACCGCACCGTGCGAGAAAATATTGCCCAT TCACGGCCAACAGCCACCTTGACCGAGGTGGTCAATGCCGCCAGTTTAGCGGGTGCTAACGCCTTTATTTTGGCGCTACC TTTAGGGTATGACACGGTTTTATCTGAAGGTGGTTCATCCTTATCTGGTGGGCAACGTCAACGTATTGCCATTGCTCGCA CTCTGCTCGCGAATCCCCGGATCTTAATTTTTGATGAAGCGACCAGCGCACTGGATGATGAGTCTCAGTCGGAGATTCAG AAAAACATGGCCCGCATTATCGCCAATCGCACGGTTATTACGATTGCCCATCGCCTATCGACCGTTCGTCACTGCCACCG TATTGCCGTGATAACACAAGGCCGAGTCACCGAACTTGCCAGCCATGACGAATTACTGCAATTAAACGGCAGTTACGCTC GGCTTTGGCAACAACAAGTTCATTTTAACCAAAACAAGTCCACCTTAACTAAAACAAGCCCACTTTAA Protein sequence : MENHVHSALICASRLIRLAGLNPMDIETFSQKVAIDTSVKTTLASLQRYIVQFSQTASVRFKIRKQALEKIRQEQLPLAF RDRQGNFILLARMNEQQVLLQYADDKKPQMLSYQSLADMWGGMILCCSHSRFDIRWFIPPLRRHRKPLMQVLLLSLLLQF LALISPLFFQVIMDKVLVHHALTTLEVLIFILVIVGVYEVILKGLREYIFTHTTTRVDILLGGKLFQHLIRLPLSYFKQR HVGNIVARVRELDNIRDFITGSALTLCVDVVFTLVLFIVMWCISPLLTLIILSTLPFYLLLAVMTTRPLQKKVEALCGFA AQNGAFLTETVSGVETVKSLALEPRMRQRWESQTRDFAQANFQVQNLQNLSSQAAQLLQKVAGALVIVIGAYHVMSVQLS IGQLIAFNMLALQALMPMSKLVDLWQQSIRAQVGLKLISDILSLPVEPEADPAAPHPAISGNILLKNVAFRYRPDLDPVL HDLNLSICAGENIGLVGPSGSGKSTVARLLQRLYNTEQGVITIDGYPINHLSPEYLRRQVGVVMQESYLFNRTVRENIAH SRPTATLTEVVNAASLAGANAFILALPLGYDTVLSEGGSSLSGGQRQRIAIARTLLANPRILIFDEATSALDDESQSEIQ KNMARIIANRTVITIAHRLSTVRHCHRIAVITQGRVTELASHDELLQLNGSYARLWQQQVHFNQNKSTLTKTSPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-107 | 45 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-107 | 45 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 3e-107 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPK_2004 | YP_001720744.1 | type I secretion system ATPase | VFG0841 | Protein | 4e-103 | 46 |
| YPK_2004 | YP_001720744.1 | type I secretion system ATPase | VFG1269 | Protein | 8e-112 | 45 |
| YPK_2004 | YP_001720744.1 | type I secretion system ATPase | VFG0907 | Protein | 1e-107 | 45 |
| YPK_2004 | YP_001720744.1 | type I secretion system ATPase | VFG1557 | Protein | 1e-107 | 45 |
| YPK_2004 | YP_001720744.1 | type I secretion system ATPase | VFG1501 | Protein | 1e-107 | 45 |
