Gene Information

Name : YPK_0442 (YPK_0442)
Accession : YP_001719198.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 484200 - 484412 bp
Length : 213 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ypi:YpsIP31758_0376 cold shock DNA-binding domain protein

DNA sequence :
ATGTCTAATAAAATGACTGGTTTAGTAAAATGGTTTGACGCTGGTAAAGGTTTTGGTTTCATCTCTCCGGCTGATGGCAG
CAAAGATGTGTTCGTTCACTTCTCTGCTATCCAGAGCAATGATTTCAAAACCCTGGATGAAGGCCAAAATGTGGAGTTCT
CTATCGAGAACGGCGCTAAAGGCCCTGCAGCGGTAAACGTTATTGCGCTGTAA

Protein sequence :
MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSNDFKTLDEGQNVEFSIENGAKGPAAVNVIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-22 82
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-10 50