Gene Information

Name : YPK_0443 (YPK_0443)
Accession : YP_001719199.1
Strain : Yersinia pseudotuberculosis YPIII
Genome accession: NC_010465
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 484672 - 484884 bp
Length : 213 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ypi:YpsIP31758_0376 cold shock DNA-binding domain protein

DNA sequence :
ATGTCTAATAAAATGACTGGTTTAGTAAAATGGTTTGACGCTGGTAAAGGTTTTGGTTTCATCTCTCCGGCTGATGGCAG
CAAAGATGTGTTCGTTCACTTCTCTGCTATCCAGAGCAATGATTTCAAAACCCTGGATGAAGGCCAAAATGTGGAGTTCT
CTATCGAGAACGGCGCTAAAGGCCCCTCAGCAGTAAACGTAATCGCCCTGTAA

Protein sequence :
MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSNDFKTLDEGQNVEFSIENGAKGPSAVNVIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-22 83
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-10 50