|
Name : YPK_0478 (YPK_0478) Accession : YP_001719234.1 Strain : Yersinia pseudotuberculosis YPIII Genome accession: NC_010465 Putative virulence/resistance : Virulence Product : virulence plasmid 65kDa B protein Function : - COG functional category : - COG ID : - EC number : - Position : 522649 - 527118 bp Length : 4470 bp Strand : - Note : PFAM: virulence plasmid 65kDa B protein; KEGG: yps:YPTB3553 insecticidal toxin complex DNA sequence : ATGGAAAACAGTAAACAGCAAGTGGCCGTTGCTCCCTTGTCGCTCCCTAAAGGGGGCGGTGCGATTACCGGTATGGGCGA TAGTTTAGGTCCTATCGGCCCCAGTGGCATGGCAACACTGACGCTGCCCCTGCCGATCTCCGCAGGCCGCGGTTACGCCC CCTCGCTCACGCTAAGTTACAGTAGCGGCAGTGGTAACGGCCCGTTTGGCCTTGGCTGGCAACTCGGCACCATGGCGATT CGCCGCCGAACCAACGCCCAAGTGCCACGTTACGATGAGTATGATGAATTTCTGGCTCCCAATGGGGAAGTCATGGTGGT TGCCGCGGATCCGCAGGGCAATATCGAACGCACTGAACAGTCACTAAATGGGGAACAATTCAGCGTAATTCGTTACTTAC CACGTATTGAAGGCAATTTTCATCGCATTGAGTATTGGCGACCCCGGACAAATAACAGCCAGGCACCGTTTTGGTTAGTC CACAGTTCAGATGGCCAAAAACACGGTTTGGGATATTCCGCCTCAGCCCGAATTGCCGATCCACTGCACCCTGAGCATAT TGCTGAATGGCTACTGGAAGAGTCGGTGTCTCTGAGCGGTGAGCATATCTGCTACCAGTATCAGGCAGAAGATGAACAGG ATATTGACGAATCTGAGAAACAAAATCATCCGGCAGCCAGTGCGCAACGCTATCTAAGCACCGTGGTTTATGGCAATAGA GAAGTGGCGCATGAACTCTATTGTCTGACTCAGCGACCTGCGCCGACAAGCTGGTTATTTAGCCTGATCTTCGATCACGG CGAATACAGTAATATTGCGGAGCAGGTGCCGGTAATCATAAAAGGAAAATCTTGGAATTTCCGTCAGGACGCCTTCTCAC GCTTTAGTTGCGGCTTTGAAGTGCGTACCCGCCGCCTGTGTCAGCAAGTGTTGATGTACCATAATTTGTCAGCGCTTAAA GGTGATGAACCCGATGCTCAAGCCACGCTGGTTAGCCGTCTGCGTTTACACTATCAGCACGATGCTTATGCCACCCAACT GGTGGGTTGTCAGCAGTTAGCCCATGAACCCGATGGCACCAAACGTAGCCTGCCACCGCTAGAATTTGATTATCAGGATT TTTCAACGCGTGACGCCCTTGGTTGGCAACCACTTACTGATTGGGCTGAATTTAACTATCAGTACCAAATGGTGGATCTC AACGGTGAAGGGATACCGGGGATGTTGTATCAGGACAGCGGTCACTGGATTTATCGCCCACCGGTTCGCCAACCAGGCAC CGCCGACGGCATCACTTTTGGCGCGGCCCAACGGTTACCGAGCCTACCCGCGATGCGCGAAAATGCCATGTTGATGGATA TCAATGGTGACGGCAAGCTGGATTGGGTGATCAGTCAACCGGGCTTAGCGGGCTACTTTAGCCGTGATCCTGACCTTAGC CGTGATCCTGATCTTAGCTGGACACAATTCATCCCGTTATCTACCTTGCCAGCGGAGTATTTCCATCCACAAGCGCAACT GGTCGATTTAGCCGGCAGCGGGTTATCTGATCTGGCGTTAGTCGGGCCAAAAAGTGTCCGCGTGTATACCAATCTGTGTG ACAGTTTTGCTGCCGCAACCCAAGTAGCACAAGATGATGACATCACGCTACCACTGCCCGGAGTTCACTTCACTGAACTG GTGGCGTTCAGCGATGTGATGGGGTCGGGCCAACAACATCTGGTGCGAATACGCCACAATAGCGTCACCTGCTGGCCCAA TCTCGGCCATGGCCGTTTTGGTCACCCCCTCTCTTTACCGGGGTTTAACCAGCCCATTGAGCAATTTAATCCGCTAGCGA TCTATCTGGCGGATATTGATGGCTCCGGTACCATTGACCTTATTTATGCCACCACCAGCCAACTGCTGATTTACCGCAAC CAGAGTGGTAACCGCTTTGCCGAACCAGTGGCTATCGCATTGCCAACAGGCATTCGCTTTGATAATAGCTGCCAACTGTC ACTGGCAGATATTCAGGGGCTGGGCGTGGCCAGCATCATGTTGAGTGTGCCGCACCCCACCACACAACATTGGCGCTATG ATTTTGTCGCCAGTAAACCCTATTTACTGTGCACCACCAACAATAATATGGGCGCAGAGAGTCAGTTGTTTTACCGCAGT TCAGCCCAATTCTGGCTGGATGAAAAAGCGCAGGCGGCCAAACAGGGCCGATCACTGGCCTGCCAGTTACCCTTTCCGAT CCATCTATTAGCGCAAACCACACAACTTGATGAGATCACCGGAAACAGCCTGAGTCAAACCGCCCGCTACTTCCATGGTT TTTATGATGGCGTACAACGTGAATTCTGTGGTTTTGGCCGTGTCGATACGCTGGATACCGATACCTCCGCACAAGGCAGC GCCGCTGAACGCACTGCGCCGACCAAAAGTAGTAACTGGTTCCATACCGGCCGGGCAGACAATGAGACACTATGGCAAAG TGAGTACTGGCAGGGCGATGACCAAGACTACCCATTACTTCCCACCCGTCTGACAAAATTTATTAACGATACCCAAGGTG ACGACGTACTCAGTGAACTCGATGATAATCAAACGTTTTGGTTACACCGGGCACTGAAAGGTTCATTGTTGCGCAGCGAA CTCTATGGTCTGGACGGTAGCGAACTGGCCACACAACCCTATAGCGTCAACAGTGCTCGCTATCAGGTGCGGCAAATTCA ATCCTCTACGGATGAAATAACCTCCCCGGTAGCATTACCGATGATGCTGGAACAACTCAACTATCACTACGAACGCATAG TGCAAGACCCGCAATGCAACCAACAGATTGTGCTACGTTGCGATGAATTTGGTCACCCATTGCACAGTGCGACAATCTAT TATCCACGCCGCGATAAAGCCAGTATTCCTCCGTATTCCTGGCTGGCTGAAGGACATTGGGACAGCCATTTTGACGAGCA GCAGCAGCAGTTGCGCATCACTGAAAGCCAGCAATCTTATCACCATGAGATCAGTGATAAATTCTATGTGCTAGGCCTGC CGGCCGGGCAGCGCAGTGATGTACTGACCTATCCAGACAATTTCGTGCCTACAGCGGGGATTCATTGGGAAGAATTACAA CAACCAGAGGGCCTGCTCGGTACTAAAGCAGAGCGAACCTTTGCCGGGCAGCAGCAGGTTTTCTACGCCTCGGACACCAT TCCGGGCCTGGTTGCCTATAGCCAACAGGCGGAATTTGACGATCAAACCTTGGCCGCGTTGGATGAATTATTACCAACGA ATGAGCGTGAACAACAGCTTATCGAGGCAGGTTATCAACGAGCACCCCGTCTATTTTCTCGCCCCGGAGAAACAGATATT TGGGCCGCCCAACGTGGGTTTACTGACTATGGCGATGCATCTCGTTTCTACCGCCCCATCAGTCAACGTAGCTCACCATT GGTAGGAAAAACAGCCTTAGAATGGGATAAAAATAGCTGTGCCATTACCCAAATGATATTGGCTGATGGCAGTACCACCC AGGCTGAATATGATTATCGTTTTATCACCCCTTATCACCTCACGGATATCAACGATAACTCCCGTCATATTGAACTGGAT GCGCTGGGGCGCGTCACCTCCAGCCGTTTTTGGGGCACCGAGCTTGACTCACAAACCGGTGAGGTCAGCACAACCGGTTT CCCTTTAATCGCTGAGCCCCCCTTTACCGTACCCAATTCAGTTGATGCCGCTATCAGCATGGAGAATACCCAGGTTCCCG TCGCGCAATTCTCTGTCTATCAACCTCAAAGCTGGATGATTTCGTTACAGCTTGATGACATTGAAACATTGTCTGAAACC AATAACGTCACTCTAGAATATCTATTCCAGAATCATATTCTGATCGATAACTATTATCTTTGCCCCCTTGCGCTACGTCG CTGGATAAGACAAAGCAACCCTCTCATCACCGAATACGTCGGCCTGACATTGAAAAATCCCGTGCGCCAACCCCCCCATG TCTTAACCGTCGTCGTGGATAACTACTTTTCTGCTGCTGAGCCACAACAACATCAACAAACTCTCGCTTTCAGCGACGGC TTTGGCCGCGTGTTGCAAAGCGCGCAACGGGTGGAGGCAGGAACCGCTTATTTCCACACAGGAGAGGGCGGTCTGGAGAT GGATCAACAAGGTCATCTCACGCAAGACGAGAGCGATCAACGCTGGGCAGTTTCTGGCCGTACCGAGTACGACAATAAAG GTCTGCCTATCCGCCGCTATCAACCCTATTTCCTCGATGACTGGCGTTATATCGCGGATGACAACGCCCGCAAAGAAGCC TGGGCCGACACCCATATTTACGACCCACTCGGACGAGAAATAAAAGTGATCACCGCCAAAGGTTACCTGCGACGAGCACA CTATTTCCCGTGGTTTGTTATCAGCGAGGATGAAAATGACACGGCGTCAGAAATCACGCCGAATCCCTAA Protein sequence : MENSKQQVAVAPLSLPKGGGAITGMGDSLGPIGPSGMATLTLPLPISAGRGYAPSLTLSYSSGSGNGPFGLGWQLGTMAI RRRTNAQVPRYDEYDEFLAPNGEVMVVAADPQGNIERTEQSLNGEQFSVIRYLPRIEGNFHRIEYWRPRTNNSQAPFWLV HSSDGQKHGLGYSASARIADPLHPEHIAEWLLEESVSLSGEHICYQYQAEDEQDIDESEKQNHPAASAQRYLSTVVYGNR EVAHELYCLTQRPAPTSWLFSLIFDHGEYSNIAEQVPVIIKGKSWNFRQDAFSRFSCGFEVRTRRLCQQVLMYHNLSALK GDEPDAQATLVSRLRLHYQHDAYATQLVGCQQLAHEPDGTKRSLPPLEFDYQDFSTRDALGWQPLTDWAEFNYQYQMVDL NGEGIPGMLYQDSGHWIYRPPVRQPGTADGITFGAAQRLPSLPAMRENAMLMDINGDGKLDWVISQPGLAGYFSRDPDLS RDPDLSWTQFIPLSTLPAEYFHPQAQLVDLAGSGLSDLALVGPKSVRVYTNLCDSFAAATQVAQDDDITLPLPGVHFTEL VAFSDVMGSGQQHLVRIRHNSVTCWPNLGHGRFGHPLSLPGFNQPIEQFNPLAIYLADIDGSGTIDLIYATTSQLLIYRN QSGNRFAEPVAIALPTGIRFDNSCQLSLADIQGLGVASIMLSVPHPTTQHWRYDFVASKPYLLCTTNNNMGAESQLFYRS SAQFWLDEKAQAAKQGRSLACQLPFPIHLLAQTTQLDEITGNSLSQTARYFHGFYDGVQREFCGFGRVDTLDTDTSAQGS AAERTAPTKSSNWFHTGRADNETLWQSEYWQGDDQDYPLLPTRLTKFINDTQGDDVLSELDDNQTFWLHRALKGSLLRSE LYGLDGSELATQPYSVNSARYQVRQIQSSTDEITSPVALPMMLEQLNYHYERIVQDPQCNQQIVLRCDEFGHPLHSATIY YPRRDKASIPPYSWLAEGHWDSHFDEQQQQLRITESQQSYHHEISDKFYVLGLPAGQRSDVLTYPDNFVPTAGIHWEELQ QPEGLLGTKAERTFAGQQQVFYASDTIPGLVAYSQQAEFDDQTLAALDELLPTNEREQQLIEAGYQRAPRLFSRPGETDI WAAQRGFTDYGDASRFYRPISQRSSPLVGKTALEWDKNSCAITQMILADGSTTQAEYDYRFITPYHLTDINDNSRHIELD ALGRVTSSRFWGTELDSQTGEVSTTGFPLIAEPPFTVPNSVDAAISMENTQVPVAQFSVYQPQSWMISLQLDDIETLSET NNVTLEYLFQNHILIDNYYLCPLALRRWIRQSNPLITEYVGLTLKNPVRQPPHVLTVVVDNYFSAAEPQQHQQTLAFSDG FGRVLQSAQRVEAGTAYFHTGEGGLEMDQQGHLTQDESDQRWAVSGRTEYDNKGLPIRRYQPYFLDDWRYIADDNARKEA WADTHIYDPLGREIKVITAKGYLRRAHYFPWFVISEDENDTASEITPNP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcaC'(2) | CAI77376.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 0.0 | 58 |
| tcdB2 | AAO17202.1 | TcdB2 | Virulence | tcd island | Protein | 0.0 | 50 |
| tcdB1 | AAL18487.1 | TcdB1 | Virulence | tcd island | Protein | 0.0 | 50 |
