Gene Information

Name : EcolC_1461 (EcolC_1461)
Accession : YP_001724451.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Unknown
Product : nucleoid-associated protein NdpA
Function : -
COG functional category : R : General function prediction only
COG ID : COG3081
EC number : -
Position : 1611227 - 1612234 bp
Length : 1008 bp
Strand : +
Note : PFAM: 37kDa nucleoid-associated protein; KEGG: sdy:SDY_0893 hypothetical protein

DNA sequence :
ATGAGTCTGGATATCAACCAGATTGCTCTGCACCAGCTTATCAAGCGTGATGAGCAGAACCTTGAGCTGGTGTTGCGCGA
TTCATTGCTGGAACCGACAGAAACCGTCGTTGAGATGGTGGCAGAACTGCATCGGGTCTATAGCGCCAAAAATAAAGCTT
ACGGCTTGTTTAGCGAAGAGAGTGAACTGGCGCAGACGCTGCGCTTACAGCGTCAGGGCGAAGAGGACTTCCTGGCATTT
AGCCGCGCGGCAACCGGCCGCCTGCGTGACGAATTAGCGAAATATCCTTTTGCTGACGGTGGATTCGTGTTGTTTTGCCA
CTATCGCTATCTGGCGGTGGAGTATTTGCTGGTGGCAGTTCTGAGCAACCTGAGCAGTATGCGCGTTAACGAAAATCTCG
ACATCAACCCAACCCATTATCTTGATATCAATCATGCGGATATTGTTGCGCGTATCGATTTAACCGAATGGGAAACCAAT
CCAGAGTCCACCCGCTATCTCACTTTCCTGAAAGGGCGAGTAGGGCGCAAAGTGGCGGATTTCTTTATGGATTTCCTCGG
GGCCAGCGAAGGGTTAAACGCGAAAGCGCAAAACCGTGGGCTGTTGCAAGCGGTTGATGATTTCACTGCCGAAGCACAAC
TGGATAAAGCAGAGCGACAGAACGTGCGCCAGCAGGTTTATAGCTACTGTAATGAGCAGCTGCAGGCAGGCGAAGAGATC
GAACTGAAATCGCTGTCGAAAGAGCTGGCAGGCGTAAGCGAAGTGAGCTTCACGGAGTTTGCGGCTGAAAAAGGCTACGA
ACTGGAAGAGAGCTTCCCGGCAGACCGTAGCACACTGCGTCAGTTGACGAAGTTTGCCGGTAGCGGCGGTGGCTTGACTA
TTAACTTTGATGCGATGCTGTTAGGTGAACGCATCTTCTGGGATCCAGCAACCGATACCTTGACCATTAAAGGCACGCCG
CCGAATTTGCGCGACCAATTGCAGCGCCGGACGTCTGGCGGCAATTAA

Protein sequence :
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01050 YP_001437154.1 nucleoid-associated protein NdpA Not tested Not named Protein 3e-126 89