Gene Information

Name : ccmK (SYNPCC7002_A1802)
Accession : YP_001735046.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1887902 - 1888240 bp
Length : 339 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTATTGCAGTCGGAATGGTAGAAACCCTCGGTTTCCCCGCAGTTGTAGAAGCTGCTGACGCGATGGTAAAAGCCGC
CCGTGTAACCCTCGTTGGTTACGAAAAAATCGGTAGTGGCCGCGTTACCGTAATTGTCCGTGGTGATGTTTCTGAAGTCC
AAGCTTCCGTTTCTGCCGGTACTGATAATGTCAGCCGCGTCAACGGTGGCCAAGTGCTTTCTACCCACATCATCGCCCGT
CCCCACGAGAACCTCGAATACGTTCTGCCGATCCGGTACACCGAAGCCGTAGAACAGTTTCGTGAAAGCGTGAATCCCCA
ACCTCTGAGAAGAGTGTAA

Protein sequence : 
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTDNVSRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVNPQPLRRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 50
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 49
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK YP_001735046.1 carbon dioxide concentrating mechanism protein VFG1596 Protein 1e-16 50
ccmK YP_001735046.1 carbon dioxide concentrating mechanism protein VFG1598 Protein 1e-15 49
ccmK YP_001735046.1 carbon dioxide concentrating mechanism protein VFG1597 Protein 4e-16 47