Gene Information

Name : ccmK (SYNPCC7002_A1803)
Accession : YP_001735047.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1888337 - 1888648 bp
Length : 312 bp
Strand : -
Note : similar to sll1028 of Synechocystis sp. PCC 6803

DNA sequence : 
ATGCCTATTGCAGTTGGAATGATTGAAACCCGCGGTTTCCCCGCAGTTGTAGAAGCTGCTGACGCGATGGTAAAAGCCGC
CCGTGTAACCCTCGTTGGTTACGAAAAAATCGGTAGTGGCCGCGTTACTGTGATTGTCCGTGGTGATGTTTCTGAAGTCC
AAGCCTCCGTTTCCGCTGGCATTGAGAGCGCCAACCGTGTCAATGGTGGTGAAGTGCTTTCTACCCACATCATCGCCCGT
CCCCACGAAAACCTCGAATACGTCTTGCCGATTCGCTACACCGAAGAAGTAGAACAATTCAGAACCTATTAA

Protein sequence : 
MPIAVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIESANRVNGGEVLSTHIIAR
PHENLEYVLPIRYTEEVEQFRTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 55
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-18 55
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK YP_001735047.1 carbon dioxide concentrating mechanism protein VFG1598 Protein 8e-18 55
ccmK YP_001735047.1 carbon dioxide concentrating mechanism protein VFG1596 Protein 1e-18 55
ccmK YP_001735047.1 carbon dioxide concentrating mechanism protein VFG1597 Protein 4e-18 52