Gene Information

Name : EcSMS35_1215 (EcSMS35_1215)
Accession : YP_001743276.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Unknown
Product : transthyretin family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2351
EC number : -
Position : 1220030 - 1220443 bp
Length : 414 bp
Strand : -
Note : identified by match to protein family HMM PF00576; match to protein family HMM TIGR02962

DNA sequence :
ATGTTAAAGCGTTATTTAGTACTCTCCGTAGTAACGGCAGCATTTTCATTACCTTCTTTGGTTTATGCCGCACAACAAAA
CATTCTTAGCGTGCACATTTTGAACCAGCAAACCGGAAAACCCGCTGCTGACGTGACAGTCACTCTTGAAAAGAAGGCGG
ATAACGGCTGGTTACAACTTAATACCGCCAAAACAGATAAGGATGGACGAATTAAGGCACTGTGGCCCGAGCAAACTGCG
ACTACTGGCGATTACCGTGTCGTATTTAAAACCGGGGACTATTTCAAGAAACAAAATCTTGAAAGTTTCTTCCCTGAGAT
CCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCT
ATCGTGGCAGTTAA

Protein sequence :
MLKRYLVLSVVTAAFSLPSLVYAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTA
TTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC33718.1 unknown Not tested SPI-5 Protein 3e-42 67