|
Name : EcSMS35_1518 (EcSMS35_1518) Accession : YP_001743576.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : LysM/ErfK/YbiS/YcfS/YnhG family protein Function : - COG functional category : S : Function unknown COG ID : COG1376 EC number : - Position : 1504139 - 1505143 bp Length : 1005 bp Strand : + Note : identified by match to protein family HMM PF01476; match to protein family HMM PF03734 DNA sequence : ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCC GCTACCACCAACCGGAAGCCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCCA TCGCCCGACGTTTTGATACTGCGGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCTGGTACG ACGATAACTATTCCTTCGCAACTGTTATTACCTGATGCGCCGCGTCAGGGGATTATCGTTAACCTGGCAGAGCTGCGCCT TTATTATTATCCGCCGGGAGAAAATATCGTGCAGGTCTATCCGATAGGTATTGGTTTGCAGGGGCTGGAAACGCCAGTGA TGGAAACGCGTGTGGGGCAGAAAATCCCTAACCCAACCTGGACGCCTACGGCGGGCATTCGTCAGCGTTCGTTGGAGCGT GGCATTAAATTACCGCCAGTCGTTCCTGCCGGGCCAAATAACCCACTAGGACGTTACGCACTGCGCCTCGCGCATGGTAA TGGCGAATACCTCATTCATGGCACCAGTGCGCCGGACAGCGTCGGTTTGCGCGTCAGTTCGGGCTGTATTCGCATGAATG CGCCGGATATTAAAGCCTTATTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCC GTGGAACCGAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCAGCAGAAGAACAGCAGAACGTTCAGACAATGCC ATACACGCTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATC GTCGGGCAGGGTATCCGGTTGCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATACGCCTTCAGTAGAGTCAGCGCAG AATGGTGAACCAGAGCAAGGGAATATGTTACGCGCGACGCAGTAG Protein sequence : MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVAVSSGATPAASNTPSVESAQ NGEPEQGNMLRATQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| erfK | YP_853091.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 1e-54 | 46 |
