Gene Information

Name : cspD (EcSMS35_2280)
Accession : YP_001744327.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Unknown
Product : stationary phase/starvation inducible regulatory protein CspD
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2306316 - 2306540 bp
Length : 225 bp
Strand : +
Note : inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible

DNA sequence :
ATGGAAAAGGGTACTGTTAAGTGGTTCAACAATGCCAAAGGGTTTGGTTTCATCTGCCCTGAAGGCGGCGGCGAAGATAT
TTTCGCTCATTATTCCACCATTCAGATGGATGGTTACAGAACGCTAAAAGCTGGACAATCCGTTCAGTTTGATGTCCACC
AGGGGCCAAAAGGCAATCACGCCAGTGTTATTGTGCCCGTCGAAGTAGAAGCGGCAGTCGCATAG

Protein sequence :
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-13 56