Gene Information

Name : PputW619_1716 (PputW619_1716)
Accession : YP_001748589.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 1911061 - 1913301 bp
Length : 2241 bp
Strand : +
Note : Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space

DNA sequence :
ATGCAGTGCAGAACTTCACCCAACAGCCTGGCCCTGGCGTTCGTCGCGTTGGCGTCACCGGCCATGATGGCGACCGCCGC
TGAAACAGTGGAGCGCAGCCCTGGTGAGGTGCTGGAAATGCCGGTGGCCGACGACGCACTGGTGATCCAGGACACCCTGG
TCACTGCTGAACGCGAAGCGCGTCAGGCGTTGGGTTCGTCGATCATCACTGAGGAAGACATCAAGCGTCGCCCGCCGGCC
AACGACCTGTCCGACATCATCCGTCGGGAGCCGGGGGTCAACCTGACCGGCAACAGCGCCAGTGGTGCGCGTGGCAACAA
CCGGCAGATCGACCTGCGCGGCATGGGCCCGGAGAACACCTTGATCCTCATCGACGGCAAACCGTCCAGCGCGCGCAACG
CCGTGCGCTACGGCTGGAACGGCGACCGCGACACCCGCGGCGAAACCAACTGGGTGCCGGCCGAGGCGGTCGAGCGCATC
GAAATCCTGCGCGGCCCGGCGGCGGCGCGCTACGGCTCGGGCGCCATGGGCGGGGTAGTGAACATCATCACCAAGCGGCC
CACCGAGGCGTTCAAGGGCAGCCTCAACCTGTTCACGCAAATGCCGGAAGACAGCGCCGAGGGTGTCAGCCGTCGTGCCA
ACTTCAACCTCAGCGGCGGGCTTACCGACAACCTCGGTTTCCGTTTGTACGGTGGCCTGGCCAAGACCGACGCCGATGAC
CTGGACATCAACGCCGACCACGCCAACAGCACGCTGGTCGCCGGCCGTGAGGGCGTGCGCAACAAGGACATCAACGGCCT
GCTGAGCTGGAGGCTCAACGACGAGCACCGCCTCGAAGCCAGCGCCGGTTATAGCCGCCAGGGCAACATCTATGCCGGCG
ACACCATGAACAGCAACGGCGGCAGCAATGTCGACCTGATCTCCAGCCTGTATGGCCACGAGACCAATGTCATGCAGCGC
AACACCTATGACCTGACCCACCTTGGCGATTTCAGCTGGGGCACCAGCAAGACTAGCCTGGCTTACGAATACGTACGCAA
CTGGCGTCTCAACGAAGGCCTGGCCGGTGGCCCGGAAGGAGCGATCAACGACAGCGGTGCAGCCATGTCGCGGCTGCGCA
ACACTCGCCTGAGCAGCGAGGTGAACCTGCCGTTTGCCATGGGCAGTGTTGAACATGTGCTGACCTTGGGCGGCGAGTAC
CTGTACGAATCGCTCAACGACCAGGGCTCGTTCCGCCCCCAGAGCTTCGACCCCAGTGGCGGTGGCAGTGACGTCATCAG
TGGCTTCGACCGCAGCAACTCGAAGATGACCGCCAAGAGCTACGCGCTGTTCGTCGAGGACAATATTGTGCTGGGCGACA
CCACCGTCACCCCAGGCCTGCGCTTCGACCACCACGAAACCTTTGGCGACAACTTCAGCCCCAGCCTCAACCTGTCGCAC
AAGCTGACCGACGCGCTGTCGATCAAGGGTGGTATCGCCCGGGCCTATAAGGTGCCGAACCTGTATCAGTCCAACCCCAA
CTACCTGCTCTACAGCCGTGGCAACGGCTGCAGTGTGCAGCAGAGCAACTCCGGGGGCTGCTACCTGCAGGGCAACGCCG
ACCTCAAGCCGGAAATCAGCGTCAACAAGGAAATCGGCCTGTTGTACGACCGCGGCACCTGGCGTACCAGCGCGACGTAC
TTTCGCAACGATTACAAGAACAAGATCATCGGTGACACCGATGTGCTTTACACCATCAACAGCGGCCGCCGCGTGACCCA
GTGGGAGAACGCCGGCGAGGCACGTGTGGAAGGCATCGAGGGCAATCTGTTCGTCGAACTGACCCCGGTACTGGACTGGA
ACACCAACCTGACCTGGATGCTCGACAACGACAACCGCGAGACGGGCGAGCCGCTGTCGGTGATCCCCGAGTACACGGTC
AACAGCACCCTGGACTGGCGCGCCACCGACAAGCTTTCGTTCCAGGTGGCCGGTACCTACTACGGCAAGCAGAAGTCGCC
GACCTACAACTACCGCACCGAGGAGAGCTACGACGCCGAGGCGCAGCAGGATGTCGAGGCATACGGGTTGGTGGATGTCA
GCACCGGGTACAAGTTCAACGCCAACTATGACGTGCGGGTGGGCGTGAACAACGTGTTCGACAAGCAGATCTATCGCGGT
GGCAATGCCAGTAGCTCGGGTGCCAACACCTATAACCAGCCGGGACGTGCGGTGTTTGCTTCCTTGAATATCTCGTTCTG
A

Protein sequence :
MQCRTSPNSLALAFVALASPAMMATAAETVERSPGEVLEMPVADDALVIQDTLVTAEREARQALGSSIITEEDIKRRPPA
NDLSDIIRREPGVNLTGNSASGARGNNRQIDLRGMGPENTLILIDGKPSSARNAVRYGWNGDRDTRGETNWVPAEAVERI
EILRGPAAARYGSGAMGGVVNIITKRPTEAFKGSLNLFTQMPEDSAEGVSRRANFNLSGGLTDNLGFRLYGGLAKTDADD
LDINADHANSTLVAGREGVRNKDINGLLSWRLNDEHRLEASAGYSRQGNIYAGDTMNSNGGSNVDLISSLYGHETNVMQR
NTYDLTHLGDFSWGTSKTSLAYEYVRNWRLNEGLAGGPEGAINDSGAAMSRLRNTRLSSEVNLPFAMGSVEHVLTLGGEY
LYESLNDQGSFRPQSFDPSGGGSDVISGFDRSNSKMTAKSYALFVEDNIVLGDTTVTPGLRFDHHETFGDNFSPSLNLSH
KLTDALSIKGGIARAYKVPNLYQSNPNYLLYSRGNGCSVQQSNSGGCYLQGNADLKPEISVNKEIGLLYDRGTWRTSATY
FRNDYKNKIIGDTDVLYTINSGRRVTQWENAGEARVEGIEGNLFVELTPVLDWNTNLTWMLDNDNRETGEPLSVIPEYTV
NSTLDWRATDKLSFQVAGTYYGKQKSPTYNYRTEESYDAEAQQDVEAYGLVDVSTGYKFNANYDVRVGVNNVFDKQIYRG
GNASSSGANTYNQPGRAVFASLNISF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 3e-156 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_1716 YP_001748589.1 outer membrane receptor FepA VFG0935 Protein 3e-155 53
PputW619_1716 YP_001748589.1 outer membrane receptor FepA VFG1650 Protein 2e-156 53
PputW619_1716 YP_001748589.1 outer membrane receptor FepA VFG0923 Protein 9e-149 49