|
Name : glcF (PputW619_2200) Accession : YP_001749069.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 2446285 - 2447520 bp Length : 1236 bp Strand : - Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pen:PSEEN3188 glycolate oxidase subunit, FeS protein DNA sequence : ATGCAAACCAACCTGAGCGACAGCGCCAAGCGCCTGGCCCGCGCCGAAGAGGCCGAAAGCATCCTGCGCGCATGCGTGCA CTGTGGCTTCTGCACGGCCACCTGCCCCACCTACCAGTTGCTCGGCGATGAACTGGATGGACCGCGCGGGCGTATCTACC TGATCAAGCAAGTACTCGAAGGTGCGCCGGTCACCGCCAGTACCCAACTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGTGAGACCACCTGCCCGTCAGGGGTCAGATACCATGACCTGCTGGACATCGGCCGCGCCGTGGTCGAACAGCAAGTGCC CCGCCCGCTCGGCCAGCGCCTGCTGCGCCAAGGCTTGCGTGCAGTGGTGCCGCGCCCGGCGCTGTTCAAGGCGCTGACCC GCGCGGGCCAAACCCTGCGCCCAGTCCTGCCGGGCGCACTCAAGAGCAAGTTGCCCGCCCAGGTGGCCTCCCCTGGCAAG CGCCCGGCGGTGCGCCACGCACGCCGCGTGCTGCTGCTTGAAGGCTGCGTACAGCCGGCCCTGTCACCCAACACCAACGC CGCCACCGCGCGGTTGCTGGACCGCCTGGGCATCAGCGTCGAGCCAGCACGCCAAGCTGGCTGCTGTGGCGCAGTGGATT ACCACCTCAATGCCCAGGAGCAAGGCCTGCAGCGTGCCCGGCGCAACATTGATGCCTGGTGGCCCGCCATCGAAGCGGGC GCCGAAGCCATCGTGCAGACCGCTAGTGGCTGCGGCGCCTTCGTGCGTGACTACGGCCACCTGCTGGAGAAGGATCCGCT TTACGCGGCCAAGGCTGCGCGGGTCAGCGCGCTATCGCGCGACCTGGTGGAAGTGCTGCGCAACGAGCCGGTCGAGCAAC TGGGCGTGTGCGCCGAACAACGCCTGGCCTTTCATTGCCCGTGCACCCTGCAGCACGCCCTCAAGCTCGGCGGCCAGGTT GAGAGCCTGCTGGCCCGGCTTGGCTTCACTCTCACCGCAGTGCCCGACGGCCATTTGTGCTGCGGCTCTGCCGGTACCTA CTCGCTGACCCAGCCCGAACTGTCGCGGCAACTGCGCGACAACCGACTCAACGCGCTGGAAAGCGGCAAGCCGCAAATCA TCGCCACCGCCAACATTGGTTGCCAGACCCACCTCGCTGGTGCCGGACGCACACCGGTACGGCACTGGATCGAAATCGTC GAAGCAGCCCTGAACCAGGAGAACAGCCATGCATAG Protein sequence : MQTNLSDSAKRLARAEEAESILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGAPVTASTQLHLDRCLTCRN CETTCPSGVRYHDLLDIGRAVVEQQVPRPLGQRLLRQGLRAVVPRPALFKALTRAGQTLRPVLPGALKSKLPAQVASPGK RPAVRHARRVLLLEGCVQPALSPNTNAATARLLDRLGISVEPARQAGCCGAVDYHLNAQEQGLQRARRNIDAWWPAIEAG AEAIVQTASGCGAFVRDYGHLLEKDPLYAAKAARVSALSRDLVEVLRNEPVEQLGVCAEQRLAFHCPCTLQHALKLGGQV ESLLARLGFTLTAVPDGHLCCGSAGTYSLTQPELSRQLRDNRLNALESGKPQIIATANIGCQTHLAGAGRTPVRHWIEIV EAALNQENSHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 7e-146 | 75 |
