Gene Information

Name : PputW619_3414 (PputW619_3414)
Accession : YP_001750267.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3757214 - 3757465 bp
Length : 252 bp
Strand : +
Note : KEGG: pen:PSEEN2205 cold-shock protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCAAGCGGTAAAGTCAAGTGGTTCAACAATGCCAAGGGCTACGGATTCATCAATGAAGACGGCAAAACCGACGACCT
GTTCGCCCATTATTCGGCGATCAAGATGGACGGTTACAAAACCCTCAAGGCCGGACAAGCCGTGACTTTCGAGATCGTTC
AGGGCCCCAAGGGCCTGCATGCGACCGAAATCGCCAACGCTATTGCCAGCACCTCAACGGGGGCCTCGCAATCATCGACC
GCTGAAGCCTGA

Protein sequence :
MASGKVKWFNNAKGYGFINEDGKTDDLFAHYSAIKMDGYKTLKAGQAVTFEIVQGPKGLHATEIANAIASTSTGASQSST
AEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-12 50