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Name : PputW619_3648 (PputW619_3648) Accession : YP_001750499.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4062463 - 4064451 bp Length : 1989 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3777 periplasmic cytochrome c-type biogenesis protein CcmF DNA sequence : ATGAATGCGGCGTTGGTGATCCCTGAACTTGGCCAATTGGCTATGATCCTGGCGATCTGTTTCGCCGTTGTGCAGGCGAC CCTGCCGTTGCTCGGCGCCTGGCGCGGCGACAGTCTGTGGATGAGCCTGGCACGCCCGGCGGCCTGGGGCCAATTTGCCT TCCTGGCCTTTGCCTTCGCTTGCCTGACCCACGCCTTCATGACCGACAACTTCTCGGTTGCGTACGTGGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCCGTGTGGGGCGCGCATGAAGGCTCGTTGCTGCTGTGGGCGCTGAT TCTCGGTGGCTGGACCTTCGCCGTGTCGGTCTTCTCGCGCCAGTTGCCGCAAGTGATGCTGGCGCGGGTGCTGGCGGTGA TGGGCATGATCAGTGTGGGCTTCCTGAGCTTTTTGATCATCACCTCCAACCCGTTCCAACGTTTGCTGCCGCAAGTGCCG ACCGATGGCCGTGACCTCAACCCGCTGCTGCAGGACTTTGGCCTGATCGTTCACCCGCCGATGCTATACATGGGCTATGT GGGCTTTTCGGTGGCCTTCGCCTTCGCCATCGCTGCGCTGCTGGGCGGGCGCCTGGATGCAGCGTGGGCGCGCTGGTCGC GGCCCTGGACCATCATTGCCTGGGCGTTCCTCGGCGTGGGCATCACCTTGGGCTCCTGGTGGGCCTATTACGAACTGGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCTTTCATGCCCTGGCTGGTAGGCACGGCACTGATCCACTC GCTGGCGGTGACGGAAAAACGTGGCGTGTTCAAGAGCTGGACTGTGCTGCTGGCGATTGCCGCGTTCTCGCTTAGCCTGC TGGGGACGTTCCTTGTGCGCTCCGGCGTGCTGACCTCGGTGCATGCGTTCGCCTCCGACCCGTCACGTGGCGTGTTCATC CTGATCTTCCTGCTGTTCGTGGTCGGTGGTTCGCTGACCCTGTTCGCCCTGCGTGCCCCGGTGGTCAAAAGCCAGGTGGG CTTTTCCCTGTGGTCGCGCGAAACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTGGCGGCTTCGATGATCCTGCTCG GCACCCTCTACCCGTTGGTACTCGATGCCCTGACCGGGGCCAAGCTGTCGGTAGGCCCGCCATATTTCGATGCCTTGTTC CTGCCGCTGATGGCACTGCTGATGGTGGTGCTCGGCATCGGTGTGGTGGTGCGCTGGAAGGACACTCCTGGCAAGTGGCT GGCGAGCATGATGACGCCGGTACTGATCGCGAGCGCAGTGCTGGCGCCAGTGGCCGGTTTCATCGTCGACGACTTCGACT GGCCGACCCTGACCGCCTTTGCACTGGCTGCCTGGGTGGTGCTCAGCGGGTTGCGCGACATTTTTGACAAAACCCGCCAC AAGGGCTTGGCCAAAGGCGTGCGTGGCCTGACGCGCAGCTACTGGGGCATGCAGCTGGCGCACTTGGGGCTTGCGGTGTG CGCCCTTGGCGTGGTGCTGTCGAGCAACAACAGTGCCGAGCGTGACCTGCGCCTGGCCCCGGGTGAAAGCGTGGAGCTGG GTGGTTATCAGTTCCTGTTCCAAGGCGCCAAGCACTTCGAAGGGCCGAACTTCATTTCCGACAAGGGCACCGTCGTCGTC AGCCGCGATGGCCGTGAAGTGACCACGTTGCACCCCGAGAAGCGGCTCTATACGGTGCAGCAGTCGATGATGACCGAGGC CGGCATCGATGCCGGTTTCACCCGCGACCTGTACGTTGCCTTGGGCGAGCCGCTGGACAACGGCGCCTGGGCCGTGCGCG TGCACATCAAGCCTTACGTCCGCTGGATCTGGCTGGGCGGTCTTTTGACCGGCCTGGGCGGTTTGCTGGCGGCCCTCGAC CGACGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGTCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVIPELGQLAMILAICFAVVQATLPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIIAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPSRGVFI LIFLLFVVGGSLTLFALRAPVVKSQVGFSLWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVLGIGVVVRWKDTPGKWLASMMTPVLIASAVLAPVAGFIVDDFDWPTLTAFALAAWVVLSGLRDIFDKTRH KGLAKGVRGLTRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRLAPGESVELGGYQFLFQGAKHFEGPNFISDKGTVVV SRDGREVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLDNGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDVLGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-123 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-113 | 57 |
