|
Name : PputW619_4311 (PputW619_4311) Accession : YP_001751160.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Virulence Product : TonB-dependent siderophore receptor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4772 EC number : - Position : 4752194 - 4754623 bp Length : 2430 bp Strand : - Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN1039 FecA-like outer membrane receptor DNA sequence : GTGAACAACAATAAACCTTTGCCGCGCTTGCGCGTTATGGCGCTGGCCCTGGCGGTCAGTGCCGTGGCCGTCAACAGCCA CGCCGAACAGGGCGACACCACCATCCAGATCCAGGCTCAACCTTTGGCTTCGGCGCTCAGCCAATTGGGCCAGCAAACCC ACCTGCAGCTGTTCTACAGCCCTGAGCTTGTGGCCGGCAAGCAGGCCCCGGCGGTGTCCGGTAAGCTGGCGCCGGTGCAG GCCCTGCAACAGTTGTTGCAGGGCAGCGGGCTGACCTTCGAAATGTCCCAGGATACCGTGGTGGTAAAGCCGCTGCCGAC CACCCTCGACCTGGGCAGCGGTAGCCTGGAACTGGCGCCCACCGATATCAACGTGGTTGGTGACTGGCTGGGTGATGCCG ATCAGGCCGTTGTGCAGAATCACCCCGGTGCGCGCACCGTGGTGCGCCGTGAGGCCATGGTGGAAAAGGGCACGATGAAC GTGCGCGACGCACTGCGTGGCATCCCGGGCGTGCAAGTGCAGGACTCCAACGGCACAGGTGGCAGCGACCTGTCGCTCAA CGTAGGTGTACGCGGCCTGACGTCGCGCCTGTCGCCTCGCTCTACGGTGCTGATCGATGGCATCCCGGCCGCTTTCGCTC CTTACGGTCAGCCGCAGCTGTCCATGGCGCCGATCTCCTCGGGCAACCTCGACAGCATCGATGTGGTGCGTGGTGCCGGT TCGGTGCGCTATGGCCCGCAGAACGTCGGTGGGGTGATCAACTTCGTCACCCGGGCGATCCCGCAGCAGGCTTCGGCGGA GCTTTCCACCACCCTGGAGACCTCGCAGTACGGCGGTTGGAAGCACACCGAGTCGGCCTTCGTCGGCGGCACTGCCGACA ACGGCATGGGTGTGGCGCTGCTGTACACCGGGGTGAACGGCAACGGCTACCGGCAGAGCAACAACGGCAATGACATCGAC GACGTCATCCTCAAGACCCACTGGGCACCGACCGACGTTGACGAGTTCTGGCTCAACTTCCATTACTACGATGGCCGTGC CGACATGCCCGGTGGCCTGACCCAGGCCCAGTACGACAGCAATCCGTACCAGTCACTGCGTGATTACGATTACTTCGCCG GGCGTCGCAAGGACGTGTCGTTCAAATGGCAGCGCCAACTCGACGAGGCCACCCAGTTCGAAGTGCTGACGTACTACACC GACAGCTTCCGCGGCAGCACCATTGCCTCGCGTGACATGAAGACCCTGTCGTCCTACCCGCGCAATTACCACACCTTCGC CATCGAGCCGCGCGTTTCGCGGATCTTCTTCGCCGGCCCCACCACCCAGGAAGTCAGTGTCGGTTACCGCTACCTCAAAG AAGCCATGCGCGAACAGTCGACCCGCCTGGCGCTGATCGACAACGTTCCGACGCCTACCCCGACGTCCGACGGCCATGTA TTCCAGGACCGCAGCGGCGGCACTGAGGCCAGTGCCTACTACATCGATGACAAGATCGACGTCGGCAACTGGACCATCAC CCCGGGTGTGCGCTTCGAGCACATCAATACTGACTGGCGCGACCGCCCGGTGCTGGGTGCCAACAACCGCCCGGTGGCTG AGAAGAAACGCAGCATCACCAGCAATGAACCGCTACCTGCGCTGAGCGTCATGTATCACATCTCCGATGCCTGGAAGGTG TTTGCCAACTACGAAACGTCGTTCGGCAGCCTGCAGTACTTCCAGCTGGGCCAAGGCGGTACCGGTAACAGCACGGCTAA CGGCCTGGAGCCGGAAAAGGCCAAGACCTACGAGCTGGGTACGCGCTATGACAATGGTGCTTTCGCCGGGGAGCTGACGG CCTTCTACATCGACTTCGACGACGAGCTGCAATACATCAGCAACGACGTGGGCTGGACCAACCTGGGTGCAACCAAGCAC CAGGGTATCGAGGCGTCGGTACGCTACGACCTGGCCGGGTTGGACCGGCGTCTGGAAGGGCTGTCGGTGAATGGTGGCTA CACCTACACCCGCGCGACTTATGAAGGGGAGATTCCCGGCTTCAAGGGGCGCGATCTACCGTTCTACTCACGCCAAGTGG CCACCGCCGGCCTGCGCTACGCGGTCAACCACTGGACCTGGAACCTGGACGCCTACGCCCAATCCAAGCAGCGCGCGCCG GGTACGGGGATCAATGCCGACGGGAGCTTCAATGGCGACTACATCACCGAGCCGAGCGCTGACGGGCAGTATGGCGACAT TCCGGGGTATGTGACCTGGCATGCGCGTGGTGGCTATGAGTTCGGACCGAAGATGGCCAATTTGAAGCTGGCGGCGGGGG TGAAGAACCTCTTCGACAAGCAGTATTTCACCCGCTCCAGCGACAACAATGCCGGCATTTATGTGGGTGAGCCGCGGACC TTCTATGTGCAGGCCAGCGTGGGGTTCTGA Protein sequence : MNNNKPLPRLRVMALALAVSAVAVNSHAEQGDTTIQIQAQPLASALSQLGQQTHLQLFYSPELVAGKQAPAVSGKLAPVQ ALQQLLQGSGLTFEMSQDTVVVKPLPTTLDLGSGSLELAPTDINVVGDWLGDADQAVVQNHPGARTVVRREAMVEKGTMN VRDALRGIPGVQVQDSNGTGGSDLSLNVGVRGLTSRLSPRSTVLIDGIPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAG SVRYGPQNVGGVINFVTRAIPQQASAELSTTLETSQYGGWKHTESAFVGGTADNGMGVALLYTGVNGNGYRQSNNGNDID DVILKTHWAPTDVDEFWLNFHYYDGRADMPGGLTQAQYDSNPYQSLRDYDYFAGRRKDVSFKWQRQLDEATQFEVLTYYT DSFRGSTIASRDMKTLSSYPRNYHTFAIEPRVSRIFFAGPTTQEVSVGYRYLKEAMREQSTRLALIDNVPTPTPTSDGHV FQDRSGGTEASAYYIDDKIDVGNWTITPGVRFEHINTDWRDRPVLGANNRPVAEKKRSITSNEPLPALSVMYHISDAWKV FANYETSFGSLQYFQLGQGGTGNSTANGLEPEKAKTYELGTRYDNGAFAGELTAFYIDFDDELQYISNDVGWTNLGATKH QGIEASVRYDLAGLDRRLEGLSVNGGYTYTRATYEGEIPGFKGRDLPFYSRQVATAGLRYAVNHWTWNLDAYAQSKQRAP GTGINADGSFNGDYITEPSADGQYGDIPGYVTWHARGGYEFGPKMANLKLAAGVKNLFDKQYFTRSSDNNAGIYVGEPRT FYVQASVGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 1e-134 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputW619_4311 | YP_001751160.1 | TonB-dependent siderophore receptor | VFG1047 | Protein | 8e-135 | 44 |
