Gene Information

Name : PputW619_0892 (PputW619_0892)
Accession : YP_001747766.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 986368 - 987033 bp
Length : 666 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2947 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAACCCGATAGTCTGCGTACACGGTATCGCGCGCATCTTGGGCTGCCAGCCAGTGCTGCAAGATGTCTCTTTGTCCAT
CCCCCGCGGCCAGACCTGCGTCATCATCGGCCCTTCCGGCTCGGGCAAAAGTACCTTGCTCAACCTGATCGGCCTGCTCG
ACCAGCCTTGCCGTGGCCAGGTAGTGCTGGCTGGCCGGGACATGACCGCCGCCACCGCCGACCAGCGGGCAATCATGCGT
AATCGCCTGCTGGGTTTCATCTTCCAGAGCTTCAACCTGCTGCCGCGCCTGACTGCGCTGGACAACGTCGCTTTGCCATT
GAGTTACCGGGGCATCGGGCGGGTAGCGGCACGCCAGGCGGCGCAACAGCAACTGGAGGCGGTCGGGCTAGGTCAGCGGG
CGCAGCATCTGCCTGCCGACTTGTCCGGTGGCCAGCGGCAACGGGTCGCCATCGCCCGGGCGCTGGTGACAGAGCCTGCG
TTGCTGCTGGCCGATGAGCCGACCGGTAATCTCGATGGCGCCACGGCCGAGGGTATTGCAGCGCTGTTACTGGCGCTCAA
TCGTGAGCGGGGCGTGACCTTGCTGATGGTCACCCACGACCCTGCCATGGCGCGGCGCATGGACCGTTGCATCGAGGTGC
GCAACGGTGGGGCCTTTGATGCCTGA

Protein sequence : 
MNPIVCVHGIARILGCQPVLQDVSLSIPRGQTCVIIGPSGSGKSTLLNLIGLLDQPCRGQVVLAGRDMTAATADQRAIMR
NRLLGFIFQSFNLLPRLTALDNVALPLSYRGIGRVAARQAAQQQLEAVGLGQRAQHLPADLSGGQRQRVAIARALVTEPA
LLLADEPTGNLDGATAEGIAALLLALNRERGVTLLMVTHDPAMARRMDRCIEVRNGGAFDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-23 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_0892 YP_001747766.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-37 53
PputW619_0892 YP_001747766.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-44 47
PputW619_0892 YP_001747766.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-37 43
PputW619_0892 YP_001747766.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-34 41