Gene Information

Name : Mrad2831_6494 (Mrad2831_6494)
Accession : YP_001752077.1
Strain :
Genome accession: NC_010502
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 21800 - 23965 bp
Length : 2166 bp
Strand : +
Note : KEGG: smd:Smed_0884 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase

DNA sequence :
ATGCTGAAGCCTGCTCTCATTCCTGATCAAGCCGAGCCGGTCGATACGGGCATCCGGGCGCTGTGTGCGATTGCAGGCTA
TTATCGCATCGCGACTGAACCGGATCATATCCGGCGCGAGTTGGCCCTGGATCGAACCAACGCGGACGTCAGCAGCCTAC
TGCGAGGTGCGAAGCTTTCTGGGCTCAAGGCGCGTGTCGTGCGCATTAGAAACCGGAAACGGCTGAGCCGCCTTCCTGTG
CCTGCGATCATTCGCCTCAAAGACCATAGTTTTTCCGTTTACAGTGGTGTATCGCCGGCCGGAAATTTTCGATTGGTGGA
TCCGGTCAGCCGGATTGCGCAAGATCTTCCCTATGAGCAATTTACTGACACGGTCACGGACGAGATAATACTTGTTCAAC
GTCAATTCCGAGGCTCCGGAATTGATCCAACTACATTTGGGTTCCGTTGGTTTTTACCGTCCATCTGGCGGTACCGCTCG
CCGATCGCGCATGTTCTCATCGCATCGCTATTCGTTCAGATCTTCGCGCTCGTCACACCATTGTTTTTTCAAGTCATTGT
GGACAAAGTCCTTGTTCACAAAGGCTATTCCACTCTGCTAGTGATCGTTGCTGGACTTGCCGTGATCGGCCTATTCGATG
TCGTGTTGCAGTTTCTACGCACATACGCTCTTTCGCACACGACCAATCGCATCGATGTTGAACTAGGTCAGCGATTATTT
CGCCATTTGCTCAACTTGCCACTTGGTTATTTTGAGACGAGATCCGCCGGACAGACCGTTGCTCGTATGCGGGAACTTGA
AACGATCCGTGCCTTTCTTACAGGGCAGGGGTTATTTTCGGCTATAGATCTCATTTTTACGATCATCTTTATCGCGGTCT
TGCTCGCCTATTCGGTCAATCTCACAGTTATAGTGCTTATTTCAATACCGATATACCTTGTAATCAGCGCACTTTTCCGA
CCTGCGCTTCGAGATACAATCAAGGCTAAATTCGACAGGGGTGCCGAGAGCCAGCAATTCCTCGTCGAGGCGGTAGTCGG
CATCCAGACGCTAAAGGCTTCTGCCGTCGAGCCGATGATGCGGGCACAGTGGGAGGAGCGATTAGCGGCGTACGTTCGCA
CTAGTTTCAGCGCGACCCTACTTGCGGCCGGAGGTCAGAACGCGATCCAGTATGTCAGCAAGCTTACCTCTGCGGCGCTG
ATGCTGTTCGGTGCCAAGGCCGTTATCGACGGCGACCTGACTGTTGGAGAACTCGTCGCCTTCAACATGATTGCTGGGCA
GGTCGCTCAACCTATCCTGCGGCTCTCCCAAATCTGGCAGGACTATCAGCAGGTCCAGATTTCGGTCGATCGCCTCGGTG
ATATCCTCAATGCTCCTCCGGAACAGACCTCGAAGGCGAGCGCCGGACTGCCGCCGCCGAAAGGTGCGATCGAGCTGCGC
AACGTTTCCTTCGCGTATCGTCCAGGTGCCCACGATGTCCTTCAAGACGTCTCCCTCGCTATCCGACCGGGCGAGGTGGT
CGGGATTGTCGGATCATCTGGATCGGGTAAGTCGACACTGACGAAGCTCGTACAAAGGCTCTACACACCACGAGAAGGTC
AGATCCTGGTAGACGGGATCGACATCGCACAGACCGATCCAGCTTGGCTACGCAGCAACGTCGGTGTCGTCCTGCAGGAG
AACCTGCTGTTCAACCGCACGATCCATGACAACATTGCGTTCGCCAATCCGGCCATGCCTCGTGCAGCCGTGATGAACGT
CGCTCGTTTGGCTGGCGCCGATGAGTTCATCAACCGCTTGCCGATGGGATACGACACTCAGATCGAGGAGCGGGGTGCCA
ATTTGTCAGGCGGCCAGCGTCAGCGGATCGCTATTGCCCGAGCGCTGGCAACGAACCCCAGGATCTTGATCTTCGACGAA
GCGACGAGTGCACTTGATTATGAGAGCGAGCGAGTCATCCAGACTAATATGCGACAGATAGTGAGAGGCCGCACGGTGAT
CATCATCGCTCACCGCCTCGCGACAGTGCGTCCCTGCAATCGCATCGTTGGCATGGCTGAGGGACGGATCGTAGAGGTCG
GGTCGCATGAAGATCTGCTGCGCCGGCAAGGCGGCCTCTACGCCCGACTTTGGGCCCTGCAGACCGATCAGGCGATGGCA
TCGTGA

Protein sequence :
MLKPALIPDQAEPVDTGIRALCAIAGYYRIATEPDHIRRELALDRTNADVSSLLRGAKLSGLKARVVRIRNRKRLSRLPV
PAIIRLKDHSFSVYSGVSPAGNFRLVDPVSRIAQDLPYEQFTDTVTDEIILVQRQFRGSGIDPTTFGFRWFLPSIWRYRS
PIAHVLIASLFVQIFALVTPLFFQVIVDKVLVHKGYSTLLVIVAGLAVIGLFDVVLQFLRTYALSHTTNRIDVELGQRLF
RHLLNLPLGYFETRSAGQTVARMRELETIRAFLTGQGLFSAIDLIFTIIFIAVLLAYSVNLTVIVLISIPIYLVISALFR
PALRDTIKAKFDRGAESQQFLVEAVVGIQTLKASAVEPMMRAQWEERLAAYVRTSFSATLLAAGGQNAIQYVSKLTSAAL
MLFGAKAVIDGDLTVGELVAFNMIAGQVAQPILRLSQIWQDYQQVQISVDRLGDILNAPPEQTSKASAGLPPPKGAIELR
NVSFAYRPGAHDVLQDVSLAIRPGEVVGIVGSSGSGKSTLTKLVQRLYTPREGQILVDGIDIAQTDPAWLRSNVGVVLQE
NLLFNRTIHDNIAFANPAMPRAAVMNVARLAGADEFINRLPMGYDTQIEERGANLSGGQRQRIAIARALATNPRILIFDE
ATSALDYESERVIQTNMRQIVRGRTVIIIAHRLATVRPCNRIVGMAEGRIVEVGSHEDLLRRQGGLYARLWALQTDQAMA
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 2e-152 50
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 1e-152 50
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 1e-152 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrad2831_6494 YP_001752077.1 type I secretion system ATPase VFG0907 Protein 7e-153 50
Mrad2831_6494 YP_001752077.1 type I secretion system ATPase VFG1557 Protein 6e-153 50
Mrad2831_6494 YP_001752077.1 type I secretion system ATPase VFG1501 Protein 6e-153 50
Mrad2831_6494 YP_001752077.1 type I secretion system ATPase VFG0841 Protein 5e-142 49
Mrad2831_6494 YP_001752077.1 type I secretion system ATPase VFG1269 Protein 3e-137 48