Gene Information

Name : rnhA (Swoo_2608)
Accession : YP_001760980.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 3190436 - 3190921 bp
Length : 486 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGTCTGTACTGAAACAACTCTCTATCTTTACCGATGGTTCCTGTTTGGGAAACCCAGGACCTGGCGGTTATGGCGTCGT
AATGAAATACAAGGCACACACTAAAGAGCTTTCCGATGGTTTTGCATTAACGACCAACAATCGTATGGAGTTACTCGCCC
CTATTATTGCATTAGAAGCCCTAAAAGTACCCTGTAAAATTATACTCACCAGCGATAGTCAGTATATGCGCCAAGGGATC
ACTCAATGGATCCACGGTTGGAAAAAGAAAAACTGGATAACCTCCACCAAACAACCAGTAAAAAATGTCGACCTGTGGAA
ACGCTTAGATGCAGCAACTCAGTCCCATGAGATTGACTGGCACTGGGTAAAAGGCCACGCTGGTCATGTTGAAAACGAGC
GCTGCGATACCTTAGCTAGAGTCGCCGCAGAAGCTAAGCCTACACAGGAAGATCTGGGCTACCAGCCCTCCGTCTCAAGT
AGCTAA

Protein sequence :
MSVLKQLSIFTDGSCLGNPGPGGYGVVMKYKAHTKELSDGFALTTNNRMELLAPIIALEALKVPCKIILTSDSQYMRQGI
TQWIHGWKKKNWITSTKQPVKNVDLWKRLDAATQSHEIDWHWVKGHAGHVENERCDTLARVAAEAKPTQEDLGYQPSVSS
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-44 68