Gene Information

Name : Swoo_3094 (Swoo_3094)
Accession : YP_001761460.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : anion transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0471
EC number : -
Position : 3791537 - 3792931 bp
Length : 1395 bp
Strand : +
Note : TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sse:Ssed_1560 anion transporter

DNA sequence :
ATGTCGATAGAACAAACCGATGATGCTTTGATAGCATCAACATCTGATAACGCACATAGAAAGAAACTACTGATCCTATT
CGCCGATATCCTGCTATTTCTTCTACTCTATAATTTTCTCCCGTTCGATGAAGGAGTCAACACTGGCTTCTCAGTGTTAA
TCTTTATCGCGATCCTCTGGCTGACCGAAGCTATCCATATCAGTATTACCGCCATATTAGTCCCCATCTTAGCGGTGACG
TTAGGAGTCTTTGAAACAAAAACGGCAATGAGCAACTTTGCCAACCCCATTATCTACCTATTCTTTGGTGGCTTTGTGCT
TGCAGCCGCCCTAAACCATCAAGGGATCGATAAGTTAATTGCCCAAAAGGTGTTAACGGCTTCCAAAGGAAAGCTCAGCC
TCGCCTGTATGTTTTTGTTTGGGATCACAGCGCTTCTCTCAATGTGGATAAGCAACACAGCAACAGCGGCTATGATGCTG
CCTCTTGCTTTAGGTATATTGCAGCAGCTCGACTTTAAGGAGCACAAGAGCACTTATCTATTTATGCTGTTAGGGATAGC
CTATTCAGCTAACATCGGCGGCATAGGCACACTGGTAGGCAGCCCGCCAAACGCCATCGCCGCCGCTCAAGTTGGACTGA
GTTTCAGTGACTGGCTTGAGTTTGGCCTGATAACTGTCGCACTTATGCTACCCAGCATGCTGATAGCCCTTTACCTTTTT
CTAAGACCAAATTTAAGCGTGATTTGTGAGCTTACTAAATCAGACGCTAAGCTCAACTATCAAGGAAAGTTAACCCTATT
AATCTTTATCTCAACGGTCTGTTGCTGGATCTTTAGTAAACCGCTTTCACAAGCTCTGGGAGGCATCCCTCAATTTGATA
CCATTGTCGCCTTAGGCGCTGTGGTTCTGCTGGCTGGGCTTGGCCTTGTAGAGTGGAAAAAGATTGAACGCACCACAGAT
TGGGGCGTGTTGATCCTCTTTGGTGGCGGCTTGACCTTAAGTGCTATCTTAAAAGCGACGGGAACCAGTGTGTTTCTCGC
CCATTGGGTGACAGATATTTTTGGTAATACTCATATGGCACTGTTTACTTTTGCCGTTATCTTTTTTGTCATCATGCTCA
CTGAATTTGCCAGCAATACCGCCAGCGCTGCACTACTCGTGCCCGTGTTTGCTGCCATTGCAGAAGCATTAGGTCTCTCT
CCGGTAATGCTTTCGGTATTAATCGGGATCGCAGCCTCCTGCGCCTTTATGCTTCCCGTTGCCACCCCACCTAACGCCAT
CGTGTATGGCTCTGGGTTTATTAAGCAATCAGAGATGATGCGCGCTGGTGTAATTATCAACTTTGTCAGCATGTTTGTGC
TTTATATCATCGCTCACACCTTCTGGAGCTTTTAA

Protein sequence :
MSIEQTDDALIASTSDNAHRKKLLILFADILLFLLLYNFLPFDEGVNTGFSVLIFIAILWLTEAIHISITAILVPILAVT
LGVFETKTAMSNFANPIIYLFFGGFVLAAALNHQGIDKLIAQKVLTASKGKLSLACMFLFGITALLSMWISNTATAAMML
PLALGILQQLDFKEHKSTYLFMLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLEFGLITVALMLPSMLIALYLF
LRPNLSVICELTKSDAKLNYQGKLTLLIFISTVCCWIFSKPLSQALGGIPQFDTIVALGAVVLLAGLGLVEWKKIERTTD
WGVLILFGGGLTLSAILKATGTSVFLAHWVTDIFGNTHMALFTFAVIFFVIMLTEFASNTASAALLVPVFAAIAEALGLS
PVMLSVLIGIAASCAFMLPVATPPNAIVYGSGFIKQSEMMRAGVIINFVSMFVLYIIAHTFWSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf77 AAO17231.1 Orf77 Not tested tcd island Protein 2e-96 56