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Name : Swoo_4478 (Swoo_4478) Accession : YP_001762824.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 5415454 - 5417430 bp Length : 1977 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: spl:Spea_0478 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAACTAGGACTTATTTTCCTCATTATTAGCACTGTGTCTGCCTTGCTACTGTCATTTATTCCGCTCTATGC TGCTTATACTAAAAATAGTTACCTGTTTAGCTATGTAAAAACCCTGACCGCATTAATGACTATCACCATTTGTGCCTCTA TTTTATGTCTATTAGCATCCTTTCTAATGGATGACTTCTCGGTGGCTTATGTTGCCAACCACTCAAATACTCAATTAGCC ACTCTCTATAAGGTCGCCGCAGTATGGGGAAGCCATGAAGGTTCGATGCTATTTTGGATGGTCTCAATCGCTATTTGGGG TTGCATCATAGTATTCTCTCCTCGCTACCAAGACAGGCTTTTTATTGGCCGTATGATCGCCATTTTGGCCTTTGTAATAG CTGGCTTTAATCTGTTTATGCTGTTCACCTCTAATCCATTTGCTCGCTTACTGCCAAACTTTCCGATAGAGGGGCGCGAC CTTAACCCAATTTTGCAAGACATAGGACTCATCTTTCATCCCCCTATGTTGTTCTTAGGCTATGTGGGACTCACCATCAC CTTTGCGGCTGCAATTGCGGCACTACTTGGGGGCAAGTTTACTCAGCAACATGCAAGCTACCTTCGCCCTTGGGTGTTAA TGGCCTGGGTATTTCTAACGGGTGGTAATGCTTTTGGTTCTTGGTGGGCTTATAACGAGCTAGGCTGGGGCGGTTGGTGG TTCTGGGATCCTGTTGAAAACGCTTCATTCATTCCTTGGTTGGTTGCAACGGCGCTGCTTCACAGCGTGGTATTAAGTCA GCAACGAAGTAGCTTTAGGGTGACAACATTACTCTTGTGTCTGCTCGCTTTCTCGTTAAGTTTGCTGGGTACCTTCTTAG TGCGATCTGGCATTGTGCAATCAGTACACGCCTTTGCTTCAGACCCAACCCGTGGTATGTCCATTCTGTTCCTACTTGGG GTATTTGTATGCGGCGCGTTAACCCTGTTTGCTCTCAAGGCTAACCTGATTAAATCTAAATCAGAGTTTGCGCTACTGTC GCGCGATACTGTGATACTGCTTGGTAATATCGTATTGGTGGTGGCCGCTATCTCGGTATTACTTGGCACCTTCTACCCAC TGCTATTTGAACTGCTTAATTTAGGCACCTTGTCGGTGGGCGCGCCCTATTTCAATAGCATTTTTGTGCCACTCACCTTT GTAGCGGTATTACTGATGGGCGCCGCACCACTGATAAAATGGCAACAACAATCACTTAATTGTTTATACCCACTTGCAGC CTTATTCGCACTCGCAGCCACTATTGGTGTATTGGTGGCAATGCAAACCCGTGACGGCTTTAACCCTTGGGTATGGCTTG GCGCAACGGCGGCGAGCTGGGTGTTCTTCACCTTAGGCTACTTGGTATTTAGCTTACGCTCACAAGGCGCTGCTGCCATC ACTAAAAAAGTAGCCATGATGATTGCTCACTTTGGTGTGGCCATTACCATTATTGGTGCAACGGCGGTGTCTAACTTTGA AACCCAGGAGCTGCTTAGAATGGGGCCAGGGCAAGGCAAGGTAGTCGCTGGCTACACCTTTGTTTATGAAGATACTGCCG ATGTCGACACTAAGAGCTATACCGCGATTCAGGCCAATATCCGCGTGACTGATGTTGATGACAACTTCGTGGGTTATATC ACCCCGCAAAGGCAAACCTTTAAGACCAATGCGATGGAGGTCTCTAAGGCTGGCATTATGCGCAACTTAGTGCGTGACCT GTATGTATCGAGCGGCCAGCAACTTAGTGACACTGAATATCTAGTACGTATTAGCCATAAACCTTTGGCATGCTGGATCT GGATTGGTGGGTTGATGATGATGCTAGGCGGCACAATTGCTGCTTTTTCAGCCCTATACAACCTAGGTCGCCAACCAGTC ACAGCGAAGTCATGCTCCTCACAGGCTATACCTAAATTTACCGAGGAGTTAGCGTGA Protein sequence : MIPELGLIFLIISTVSALLLSFIPLYAAYTKNSYLFSYVKTLTALMTITICASILCLLASFLMDDFSVAYVANHSNTQLA TLYKVAAVWGSHEGSMLFWMVSIAIWGCIIVFSPRYQDRLFIGRMIAILAFVIAGFNLFMLFTSNPFARLLPNFPIEGRD LNPILQDIGLIFHPPMLFLGYVGLTITFAAAIAALLGGKFTQQHASYLRPWVLMAWVFLTGGNAFGSWWAYNELGWGGWW FWDPVENASFIPWLVATALLHSVVLSQQRSSFRVTTLLLCLLAFSLSLLGTFLVRSGIVQSVHAFASDPTRGMSILFLLG VFVCGALTLFALKANLIKSKSEFALLSRDTVILLGNIVLVVAAISVLLGTFYPLLFELLNLGTLSVGAPYFNSIFVPLTF VAVLLMGAAPLIKWQQQSLNCLYPLAALFALAATIGVLVAMQTRDGFNPWVWLGATAASWVFFTLGYLVFSLRSQGAAAI TKKVAMMIAHFGVAITIIGATAVSNFETQELLRMGPGQGKVVAGYTFVYEDTADVDTKSYTAIQANIRVTDVDDNFVGYI TPQRQTFKTNAMEVSKAGIMRNLVRDLYVSSGQQLSDTEYLVRISHKPLACWIWIGGLMMMLGGTIAAFSALYNLGRQPV TAKSCSSQAIPKFTEELA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-88 | 42 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-90 | 41 |
