Gene Information

Name : Swoo_4655 (Swoo_4655)
Accession : YP_001763000.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : periplasmic protein thiol--disulfide oxidoreductase DsbE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0526
EC number : -
Position : 5634112 - 5634669 bp
Length : 558 bp
Strand : -
Note : TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_4283 periplasmic protein thiol--disulphide oxidoreductase DsbE

DNA sequence : 
ATGAAGAAGAGGCTAGTACTATTTATTCCTTTGGTACTATTTTTGGTGATGGGGGTGTTCCTTTATAAGGGACTCTTCCT
TAATCCTCAAAAGCTAGACTCTGCACTTGAGGGAAAGCCAGTTCCGGCTTTCCAACTTGAGCGTCTAGAGGACCGAAATG
AGATAATCACTAACGAAAGCTTAAAGGGTGAGGTTGCTCTATTGAATGTGTGGGCAACTTGGTGTCCATCATGTAAATAT
GAACACCCCTATTTAATGCGCTTTGCACGTCAAGGTATTCTGCCTATCTATGGTATTAACTACCGTGATGAGCGTCCACT
GGCGATTCGCGAATTAAATCGTGAAGGTGACCCTTATACTAAGAATATCTTTGATCATGATGGTCGCTTAGGTTTGGATC
TTGGTGTGTATGGTGCACCAGAAAGTTACTTAATCGATCATAATGGCATTATTCGTTACCGTTATGCGGGGCCGATCGAT
CAAAGGATATGGAGTGAAACCTTACTTCCTATGATTAAAGAACTTCAGGCTGCAGCTAAATTGGATGGTGCTTCATGA

Protein sequence : 
MKKRLVLFIPLVLFLVMGVFLYKGLFLNPQKLDSALEGKPVPAFQLERLEDRNEIITNESLKGEVALLNVWATWCPSCKY
EHPYLMRFARQGILPIYGINYRDERPLAIRELNREGDPYTKNIFDHDGRLGLDLGVYGAPESYLIDHNGIIRYRYAGPID
QRIWSETLLPMIKELQAAAKLDGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmG YP_217240.1 heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis Not tested SPI-12 Protein 2e-33 54
ccmG AAN62105.1 putative cytochrome C biogenesis protein CcmG Not tested PAGI-2(C) Protein 7e-29 41