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Name : Swoo_4656 (Swoo_4656) Accession : YP_001763001.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 5634687 - 5636666 bp Length : 1980 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: sse:Ssed_4284 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCTGAATTAGGACACCTGTCGCTGATAATAGGTTTGGCATTTGCCTTTCTATTGGCTAGCGTTCCTTTAATTGG TGTTGCACGTAAAGACCAATACTTAGTGCGTTATGCTTGGCCATTAAGTTATGGCATGTTCTTCTTTATTTTCTTATCTG TTATCGTTTTAGGCTACAGTTTTGCTATCGATGATTTCTCGGTCGCGTATGTTGCCCATCACTCAAACTCTCAATTACCT ATCTTCTTTAAGATTGCTGCAGTATGGGGTGGACATGAAGGTTCTCTGCTTTTCTGGGTATTCTCTCTGTCTGTTTGGAC TGCGGCGGTAGCTTATTTCAGTAAGGGGCTAGAGGAGGTCTTTACTGCCAGAGTATTGTCAGTATTAGCCTTGATCATAA TAGGTTTCACTCTCTTTATGATTTTGACCTCAAGTCCATTTGAGCGCTTATTCCCGACGCCAATGGAGGGACGAGATCTT AACCCTATGTTGCAAGATGTGGGTCTTATTTTCCACCCACCGATGCTTTATTTAGGCTATGTTGGTTTTGCTGTTAGCTT TGCATTTGCTATCTCTGCACTGATGGGCGGACGCCTTGACTCAGCCTGGGCTAGATGGAGTCGTCCATGGACACTTGCTG CTTGGGTATTCCTAACAGGCGGTATTTCTCTAGGTTCTTGGTGGGCATATTACGAGCTAGGTTGGGGCGGTTGGTGGTTC TGGGATCCAGTCGAAAACGCCTCATTTATGCCTTGGCTGATTGGTACTGCACTACTGCACTCAGTGATCGTCACCGAGAA GCGTGCTGCTTTCCGTAACTGGACTGTACTACTGTCAATCTTTGCCTTCTCACTAAGTTTGCTTGGTACCTTCATTGTTC GTTCTGGTGTGTTAACGTCAGTTCACTCATTCGCCGCGGATCCAAGTCGAGGTATGTTTATCCTCCTCCTCTTAGGGCTG GCGGTTGGTGGCTCATTGACCCTGTTTGCATTCCGGGCCAGTGAGATGAAGAGCCCTGCTCGTTTCGAGCTTAAATCTCG CGAAACTATGCTGTTAGTGTGTAACATTCTACTGACTGTAGCTTGTGGTACCGTTCTTCTTGGAACCCTTTACCCGCTGC TTATCGACGCTCTTAATATGGGTAAGATCTCTGTAGGACCTCCATACTTTAATGCTGTGTTCGTACCTATTGTTCTGGTT CTATTTGTCTTTATGGGTATAGGCCCTAACATTCGCTGGAAAAAATCAAAGGCGGGTAGTTTAAAGGCTAAGTTGCTTGT TCCTGCGGTTATTGCAGCGATTGTCGGTATTGCAGCGCCATTTATGGCGGACGGTAAGTTCAACGTTTGGGTTATGTTAG GTATCGCTACCGCAGTGTGGGTTACTTTAGCAACTTTGCGTGCTGGTTATGACATGATGAAGGCGAAAGATGGTTCACTG AGCTTAGCGCGTATCAATCGTAGTCAGCTAGGTATGATCATCGCCCACTTAGGTATCGCAGTATCAGTTGTCGGTGGCAC CATGGTATCGAACTACTCAATTGAAAAGAGCGTTCGCATGGGACCTGGTATCCAACAAGAGCTTGCTGGTTATACCTTTA ACTACATCGAGACGAAAAACGTTGTAGGACCTAACTACACGGCTCAACAGGGACAGATTGAAGTCACAAAAGATGGCGAC CTAGTCACCCTATTAAGACCTGATCGACGCCAGTACAATGTTCGTACTATGGACATGACAGAGGCGGGGATTGATTGGGG CTTGTTCCGTGATCTGTATGTCACCATGGGTGATCCTATTAGCAGAACAGAGTTTGCAGTACGCCTGAACTACAAACCGT TCGTTCGCTGGTTATGGTTCGGAAGCATCTTTATGATGGTGGGTGGATTCTTTGCCGCATCAGATAAACGCTACCGTGCA AAAAAAGTAACAGAAGCATCGAAGTCTGATGCTAAGAAAGCAAAATTAGCTACGGCTTAA Protein sequence : MIPELGHLSLIIGLAFAFLLASVPLIGVARKDQYLVRYAWPLSYGMFFFIFLSVIVLGYSFAIDDFSVAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFSLSVWTAAVAYFSKGLEEVFTARVLSVLALIIIGFTLFMILTSSPFERLFPTPMEGRDL NPMLQDVGLIFHPPMLYLGYVGFAVSFAFAISALMGGRLDSAWARWSRPWTLAAWVFLTGGISLGSWWAYYELGWGGWWF WDPVENASFMPWLIGTALLHSVIVTEKRAAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AVGGSLTLFAFRASEMKSPARFELKSRETMLLVCNILLTVACGTVLLGTLYPLLIDALNMGKISVGPPYFNAVFVPIVLV LFVFMGIGPNIRWKKSKAGSLKAKLLVPAVIAAIVGIAAPFMADGKFNVWVMLGIATAVWVTLATLRAGYDMMKAKDGSL SLARINRSQLGMIIAHLGIAVSVVGGTMVSNYSIEKSVRMGPGIQQELAGYTFNYIETKNVVGPNYTAQQGQIEVTKDGD LVTLLRPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISRTEFAVRLNYKPFVRWLWFGSIFMMVGGFFAASDKRYRA KKVTEASKSDAKKAKLATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-135 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-116 | 50 |
