Gene Information

Name : Swoo_4661 (Swoo_4661)
Accession : YP_001763006.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 5640722 - 5641468 bp
Length : 747 bp
Strand : +
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: slo:Shew_0188 heme exporter protein CcmC

DNA sequence : 
ATGTGGAAATGGCTACATAGTTACGCGGATCCAGAGCGCGCTTATAATCTCTCAGGAAAACTTTTGCCATGGTTCTCCAT
GCTCGCAATCTCCTTGATTGGTATTGGCTCTGTGTGGGGGCTCGCCTTCGCTCCTGTCGATTATCAACAAGGTGACAGTT
ACCGAATCATCTTTATCCATGTCCCAGCTGCCTCCATGTCAATGTCAGCCTATATGGCGATGGCAACCTCAGCATTTATC
GGCTTGGTATGGCAGATAAAATCAGCCGATTGGGCAGCAGCTGCAATCGCACCAATAGGCGCCGTTGTCACCTTTATCGC
CCTAATCACTGGCGCTACATGGGGCAAGCCTATGTGGGGAACTTGGTGGGTATGGGATGCACGTCTAACATCAGAACTTG
TACTACTCTTCTTGTACTTAGGTGTGATTGCTCTCTATGCTTCGTTTGAAGATAAAGTACTTGCAGCGCGTGCAGCAGGT
ATTCTTGCAATAGTCGGTGTAATTAACATTCCTATTATCAAATACTCTGTGGAGTGGTGGAACTCGCTACATCAGCCAGC
CACGATTAAGATAACAGAGAAGTCTTCAATGGCGGCAGAGATGCTATACCCATTACTAATTAATATTCTAGGCTTTGGTC
TTATGATAGGGGCTATCACCTTGGTACGCTTCAGAGCAGAAATTCTCGCAAGAAATAGTATGCGCCCTTGGGTAAGGGAA
CTAGCTATGACCGAAGGAGTCAAATAA

Protein sequence : 
MWKWLHSYADPERAYNLSGKLLPWFSMLAISLIGIGSVWGLAFAPVDYQQGDSYRIIFIHVPAASMSMSAYMAMATSAFI
GLVWQIKSADWAAAAIAPIGAVVTFIALITGATWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWNSLHQPATIKITEKSSMAAEMLYPLLINILGFGLMIGAITLVRFRAEILARNSMRPWVRE
LAMTEGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-38 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swoo_4661 YP_001763006.1 heme exporter protein CcmC VFG1856 Protein 3e-43 53