Gene Information

Name : Bcenmc03_1339 (Bcenmc03_1339)
Accession : YP_001764636.1
Strain :
Genome accession: NC_010508
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1478876 - 1479385 bp
Length : 510 bp
Strand : +
Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A4502 sigma-24 (FecI-like)

DNA sequence :

ATGTCCGCTGACAAGCTGTCCCTCCGTCGAGAAATCGACGCCCTCTATGCCGGCCACCACGCGTGGCTGCGCGGCTGGCT
GAGCCGGAAGCTCGGTTGCGCGCACCGCGCGGCCGACCTGGCGCACGACACGTTCGTGCGCCTGCTCGCACGCGACGAGC
CGATCGGCGCCGACGAGCCGCGCGCGTTCCTGACCACGGTCGCGCAGCGTGTGCTGAGCAACCACTGGCGGCGCGAGCAG
ATCGAGCGCGCGTATCTCGACGTGCTCGCGCAGCGCCCGGAAGCGGTTGCGCCGTCGCCGGAAGAGCGGGCCGTCGTGGT
CGAGACGCTGCTCGAGATCGACCGGCTGCTCGACGGCCTGCCGCCCGCGGCGAAGCGTGCGTTCCTGTCCGCACAGCTCG
ACGGGCTCACGCAGGTCGAGATCGCGCGCGAGCTCGGCGTGTCGCTCGCGACGGTGAAGCGCTATCTCGTGAAGGCCGGC
ACGCAGTGCTTCTTCGCGATGGCGGCCTGA

Protein sequence :

MSADKLSLRREIDALYAGHHAWLRGWLSRKLGCAHRAADLAHDTFVRLLARDEPIGADEPRAFLTTVAQRVLSNHWRREQ
IERAYLDVLAQRPEAVAPSPEERAVVVETLLEIDRLLDGLPPAAKRAFLSAQLDGLTQVEIARELGVSLATVKRYLVKAG
TQCFFAMAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-35	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Bcenmc03_1339	YP_001764636.1	ECF subfamily RNA polymerase sigma-24 factor	VFG1049	Protein	4e-36	49