Gene Information

Name : M446_4431 (M446_4431)
Accession : YP_001771207.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 4884702 - 4886684 bp
Length : 1983 bp
Strand : -
Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mex:Mext_1406 cytochrome c assembly protein

DNA sequence :
TTGCTGATCGAGGCTGGTCACTACGCGCTGGCGCTCGCGCTCGCCCTCTCGCTCGCCCAGGCGGTGATGCCGGCCTGGGC
CGCCCGCGCCCGCGACCCAATCCTGCGCAGCGTCGCCGTTCCGGCCGCGCTCGCGACCTTCGCCTGCATCGCCTTCGCGT
TCGCCGCCCTCACGCTGGCGCATGTGCGCTCGGACTTCTCGGTCCTCAACGTGTTCGAGAATTCCCACTCGCTCAAGCCG
CTCGTCTACAAGATCTCCGGCGTCTGGGGGAACCACGAGGGCTCGATGCTCCTCTGGGTGCTGATCCTGGCGCTGTTCGG
GGCGATCGTGGCGCTCGCCCGCGATTCGGTTCCGGCGGCCCTGCGGGCCAACACGCTGGGCGTGCAGGCCACGGTCACCT
TCGTGTTCCTGCTCTTCATCCTGACGACGTCGAACCCCTTCGCGCGGCTCGACCCCGCCCCGGCCGAGGGACGCGACCTC
AACCCGATCCTCCAGGATCCGGGCCTCGCGATCCACCCGCCGCTCCTCTACCTCGGCTATGTCGGGTTCTCGATCACCTT
CGCCTTCGCGATCGCGGCACTCCTCGAGGGGCGCATCGACGCGGTCTGGGCCCGGGCGGTGCGGCCCTGGACGCTCCTGG
CATGGTGCTTCCTCACGGTCGGCATCGCGATGGGCTCGTACTGGGCCTATTACGAGCTCGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTCGAGAACGCCTCGCTGATGCCCTGGCTCGCCGGGACCGCGCTGATCCACTCCACCGTCGTGATGGAGAA
GCGCGACGCGCTCAAGGTCTGGACGGTGCTGCTCGCCATCCTGACCTTCTCGCTCTCGCTGCTCGGCACGTTCCTGGTGC
GCTCGGGCGTGCTCACCTCGGTCCACACCTTCGCGACCGACCCGGCGCGCGGCACCTTCATCCTCGCCATCCTGGTCCTG
TTCATCGGCGGCTCGCTGGCGCTGTTCGCGTGGCGGGCGCCGCTGCTGCGCCAGGGCGGGATCTTCGCGCCGATCTCCCG
CGAGGGGGCGCTCGTCCTCAACAACCTCTTCCTGTCGGCGGCCTGCGCCACGGTGCTGGTCGGCACCCTCTACCCGCTGG
TCCTCGAATCCCTGACCGGCGAGAAGATCTCCGTGGGGGCGCCGTTCTTCAACCTCACCTTCCTGCCGCTCGCGGTGCCC
CTCCTCCTGCTCGTCCCCTTCGGGCAGACCCTGGCCTGGAAGCGGGGCGACCTCGGGGCGGCGGCGCAGCGCCTGCTGAT
CGGCGTCGGTGCCGGGATCGCGGCGACGCTCGGGATGATCGCCCTGCGGCGCGGCGGGCCCGCGGCGGCGCCGCTCGGCA
TCGGTCTCGGCGCCTACCTGGTGGTCGGCGCCGCCATGGAGATCGCGACCCGCGCCAAGGGGCGCTCCCTCGGCCTGTCG
CTGCGCCGCGCCGCCGGCCTGCCGCGCTCGGCCTGGGGCACCGCGATGGCGCATGCGGGCGTCGGCCTCACGGTGATCGG
CATCGCCGCCCAGGCCTGGAGCGTCGAGGCGCTCGCCACGGTGCCGCGGGGCGGTCAGCTCACGGCCGGCCCCTACACGG
CGACCCTGAGCGGGATCGTGCCGCGCACCGGGCCGAACTACACCGAGACCGTGGCCCAGCTCGCGATCCGGGGACCGGAC
GGCGCGCTCGTCGGCACGCTGGACCCCGGCAAGCGCTTCTTCGGCGCCCGCAACATGGCGGTGAGCGAGGCGAGCCTGCT
GACGATCGGGGTGAGCCAGGTCTACGCGAGCGTCGGCGAGAGCCAGGCGGACGGCGCGCTCGGCATCCGCCTCTACTACA
AGCCGCTGGTGCTGCTGATCTGGCTCGGCGCCGTGGTGATGGCGCTCGGCGGCGGGCTCTCCCTCACCGACCGGCGCTTC
CGGATCGGCGCCCCTGCCCAGCGCCGGGTGCCCGCCGAGTCCGCGCCGGTTCCGGCGGAGTAG

Protein sequence :
MLIEAGHYALALALALSLAQAVMPAWAARARDPILRSVAVPAALATFACIAFAFAALTLAHVRSDFSVLNVFENSHSLKP
LVYKISGVWGNHEGSMLLWVLILALFGAIVALARDSVPAALRANTLGVQATVTFVFLLFILTTSNPFARLDPAPAEGRDL
NPILQDPGLAIHPPLLYLGYVGFSITFAFAIAALLEGRIDAVWARAVRPWTLLAWCFLTVGIAMGSYWAYYELGWGGWWF
WDPVENASLMPWLAGTALIHSTVVMEKRDALKVWTVLLAILTFSLSLLGTFLVRSGVLTSVHTFATDPARGTFILAILVL
FIGGSLALFAWRAPLLRQGGIFAPISREGALVLNNLFLSAACATVLVGTLYPLVLESLTGEKISVGAPFFNLTFLPLAVP
LLLLVPFGQTLAWKRGDLGAAAQRLLIGVGAGIAATLGMIALRRGGPAAAPLGIGLGAYLVVGAAMEIATRAKGRSLGLS
LRRAAGLPRSAWGTAMAHAGVGLTVIGIAAQAWSVEALATVPRGGQLTAGPYTATLSGIVPRTGPNYTETVAQLAIRGPD
GALVGTLDPGKRFFGARNMAVSEASLLTIGVSQVYASVGESQADGALGIRLYYKPLVLLIWLGAVVMALGGGLSLTDRRF
RIGAPAQRRVPAESAPVPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 2e-96 49
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 2e-83 48