Gene Information

Name : rnhA (Xfasm12_1362)
Accession : YP_001775922.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 1419618 - 1420070 bp
Length : 453 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGAAATCGATCAACGCGTACACGGACGGTTCTTGTCTTGGTAATCCTGGTCCTGGTGGTTGGGCTGTGTTGTTGCGTTA
TAAAAACAATGAGAAGGAGTTAGTTGGTGGTGAGCTTGATACGACCAATAATCGAATGGAGTTGATGGCTGCGATTATGG
CTCTGGAGCGGTTGAGTGAGCCTTGTCAGATCAAGCTTCATACTGATTCGCAGTATGTCCGCCAAGGGATCACTGAGTGG
ATGTCCGGTTGGGTACGGCGTGGTTGGAAAACTGCCGCCGGTGACCCGGTCAAGAATCGTGATCTATGGGAGCGGTTGTG
TGCGGCTACGCAGCGGCACATGGTCGAATGGTGTTGGGTCAAGGCTCACAATGGTGATTCGGATAATGAACGGGTTGATG
TATTGGCCCGCGGCCAAGCGATGGCGCAGCGTAGTACGGTAGCAAGTCGATGA

Protein sequence :
MKSINAYTDGSCLGNPGPGGWAVLLRYKNNEKELVGGELDTTNNRMELMAAIMALERLSEPCQIKLHTDSQYVRQGITEW
MSGWVRRGWKTAAGDPVKNRDLWERLCAATQRHMVEWCWVKAHNGDSDNERVDVLARGQAMAQRSTVASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 8e-38 57