Gene Information

Name : Xfasm12_0811 (Xfasm12_0811)
Accession : YP_001775429.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Virulence
Product : Shf protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 871151 - 872005 bp
Length : 855 bp
Strand : -
Note : KEGG: xft:PD0687 Shf protein

DNA sequence :

ATGAGCCGTGCAACAGCCGTCCCTGTCCTCATGCACCATCACGTTTCACCATCAACGGGCATGATCACCGTCTCCCCGGA
ACACTTTGAAAGCCAGATTGCATGGCTGGCGAATGACGGCTGGACCTCACTCACCCTGGAGCAATACGCCGGCTTTCTCG
CCGGTCAACCCGTGCCGCACAAATCGATCGTGATTACCTTCGACGACGGCTATCTGGATAACTGGGTCTACGCACATCCG
ATCTTGCAGAAATACCACATGCATGCCGTCGTTTTCATTGTCACCAGCTGGATTGGCGATGGCCCAGCGCGTCCCCATGC
TGGACAATCCGGCGCGATATTGCCCACAACGCCAAACCACCATGCGTGCGAAACAGCCATCCTGCATGAGGGGCGCACCG
ACGAAGTGATGCTACGTTGGAGCGAAGTGCAAGCAATGATCGCCGCAGGCACCTTTGAGGCACATTGCCATACACACACC
CATACACGCTGGCTAACACTACAACTCAGCCGCGCCCAACGACGCGAAGGTCTCGACCGGGACCTCATCACCGCACGTAC
AGTACTGCAACAACGCCTAGGCAACGTCTCCAACACACTGTGCTGGCCATACGGCGACTTCGATGCAGACCATATCGAAA
TCGCACGCGCCCATGGCTTTCGCTATTTCCACACCACACATCCCTTTGGACGCAACGTCATTGGCGGCAACCCAGAACAC
ATCTACCGCTTCGCGCTCCGTAACCGCCCGGGGCACTGGCTGCGCAAACGCATCGCGCTCAGCTACCACCCACTCATTGC
ACCATTATTCAACCGCTTCAAAAGCCATAAAAAAGGCATGCAGCCGGGTCCATGA

Protein sequence :

MSRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDGYLDNWVYAHP
ILQKYHMHAVVFIVTSWIGDGPARPHAGQSGAILPTTPNHHACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHT
HTRWLTLQLSRAQRREGLDRDLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
shf	AAL08449.1	putative protein Shf	Not tested	SRL	Protein	1e-40	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Xfasm12_0811	YP_001775429.1	Shf protein	VFG1040	Protein	5e-41	43