Gene Information

Name : Bcenmc03_5003 (Bcenmc03_5003)
Accession : YP_001778623.1
Strain :
Genome accession: NC_010515
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 2052863 - 2055049 bp
Length : 2187 bp
Strand : +
Note : KEGG: rso:RSp0292 probable cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin proce

DNA sequence :
ATGAACAGTTCCAATCTCCGGCCTCCGGCGTCGTCTCCGGCGCAGGATGTCGACTCCGGGCTCGCGGTCGTTCTGACGAT
GGCCAGCCTGCACGGCATCGCAGCCGACGAAGCCGCGTTGCGACATGAATTCGGCTTCTGCCGTTTCGATACTCAAACAA
TCCTGCGAGCCGCGCGTTCACTTGGCATGACGGCCCGGGCCGTTCAGCAGCACCTCGAACGACTGGATCGAGCGCCTTTA
CCTGCGGTCGCACGGATGAAGGGCGAAGGTCGCTATTTCGTAGTCGCGCAGTATCAGGCCGGGGATGGAACGCGCGCGCC
TCGGATGCTGGTCCAGTTTCCGGGTGAGGCGCCTACCGTGCTGACGCGCGAGCGTCTTCTGGAAATCTGGACGGGTGAGC
TCATCTATTTCACGAGCAAGAACAGCATTGCGGGTACCCTGGCACGCTTCGATTTCAGCTGGTTCATTCCGGCAATCGTC
ACGTACCGGAAGCTGCTGGGCGAAGTCCTCGCGATTTCTCTGGTGTTGCAGTTGATTGCGCTCGCCACGCCGCTTTTCTT
CCAGGTGGTGATGGACAAGGTGCTGGTCAATCACGCGATGAAGACCTTGAACGTGATCGCCGTTGGGTTGATTTGCGCGA
CGCTGTTCGAAGCGGCGCTTTCGGGGATACGCACGTGGGTCTTCGCGCATACGAGCAGCAAGATCGACGTCGAACTCGGC
GCGCGGCTCTTCCGGCATCTTTTGGCGTTGCCGCTGGCATGGTTCCAGGCGCGCCGTGTCGGCGATTCTGTCGCCCGTAT
TCGCGAACTCGAGAACATTCGCGCGTTCCTCACCGGCAACACAGTGACGCTGCTGATGGACCTCGCGTTTTCGTTCGTTT
TCCTCGGGGTGATGCTCTGGTACAGCGCGTGGCTTACGTTGATCGTCTTTGTTTCGATTCCGCTCTACGTGCTGTTGTCG
GTCGTGTTTACGCCGATCATCCGGCGGCGCCTGAACGAAAAATTCAATAAGGGCGCCGAGAATCAGTCGTTCCTCGTTGA
AACCATCAGCGGGATCGATACGGTCAAGGCGATGGCACTCGAACCGCGCTGGACGGACCGATGGGACCGTCAACTGGCCG
CTTATGTGAGTGCGGGCCTGTCGGCGACCAACGTTGCCACGATTGCAAGCGGTGGCGTGACGTTGATCAGCAAGCTGGTG
ACCGCGGCGATCATGTGGCTGGGCGCCACGCTGGTGATCGACGGCAAGTTGACGGTCGGCGAGCTCGTCGCGTTCAACAT
GCTGGCCGGGCAGGTATCCAGTCCGATACTGCGTCTCGCGCAGCTGTGGAACGACTTTCAACAGGTAGGGATTTCGATGG
GGCGCCTCGGGGATATCCTGAATACGGCGCCCGAAACCGCAGCCAAAAAGACGCGAGTACCCCGTCTCGACGGTGCGATC
GAGTTCGACCAGGTATCGTTTCGCTACCGGCCGGATGCGAGCGATGTCATCCGGCAGATCTCCGTCAGGATCGCGGCGGG
GGAAGTCATTGGAATCGTCGGCCGCTCCGGGTCGGGCAAAAGCACGCTGACCAAGCTCGTGCAGCGGCTCTACGTGCCGG
ATCGCGGGCGAGTGCTGATCGACGGGCAGGATATCGCCGTGATCGATACGGCAAGCCTCCGCCAGCAGATCGGTGTCGTT
CTACAGGAAAACACGCTGTTCAATCGTTCGGTACGGGACAACATCGCGCTGGCCCGACCCACTGCGTCGATCGACGCGGT
GATCGATGCAGCGCGGCTGGCCGGCGCACACGAGTTCATCTGCGAGCTTCCGGAGGGTTACGACACGCTCGTCGGTGAGC
ATGGCACCGGGCTTTCGGGCGGCCAGCGGCAACGCATCGCCATTGCCCGCGCATTGATGACCGATCCACGCGTCCTGATA
TTCGATGAGGCGACCAGCGCGCTCGACTACGAATCCGAAGCCGTCATACAGGCCAACATGCGTGACATCTGCGCGCGACG
CACGGTATTGATCATTGCGCATCGGCTCTCGGCGGTGCGCGATGCCGACCGGATTCTCGTGATGGATCGCGGGCAGATCG
TGGAAAGCGGTACGCACGACACGCTGCTGCGCATACGGGAAGGCATCTACGCACACTTGTATTCGCTGCAACAGGGTGGT
CGTGACGTAGCGGAGGCACGGATATGA

Protein sequence :
MNSSNLRPPASSPAQDVDSGLAVVLTMASLHGIAADEAALRHEFGFCRFDTQTILRAARSLGMTARAVQQHLERLDRAPL
PAVARMKGEGRYFVVAQYQAGDGTRAPRMLVQFPGEAPTVLTRERLLEIWTGELIYFTSKNSIAGTLARFDFSWFIPAIV
TYRKLLGEVLAISLVLQLIALATPLFFQVVMDKVLVNHAMKTLNVIAVGLICATLFEAALSGIRTWVFAHTSSKIDVELG
ARLFRHLLALPLAWFQARRVGDSVARIRELENIRAFLTGNTVTLLMDLAFSFVFLGVMLWYSAWLTLIVFVSIPLYVLLS
VVFTPIIRRRLNEKFNKGAENQSFLVETISGIDTVKAMALEPRWTDRWDRQLAAYVSAGLSATNVATIASGGVTLISKLV
TAAIMWLGATLVIDGKLTVGELVAFNMLAGQVSSPILRLAQLWNDFQQVGISMGRLGDILNTAPETAAKKTRVPRLDGAI
EFDQVSFRYRPDASDVIRQISVRIAAGEVIGIVGRSGSGKSTLTKLVQRLYVPDRGRVLIDGQDIAVIDTASLRQQIGVV
LQENTLFNRSVRDNIALARPTASIDAVIDAARLAGAHEFICELPEGYDTLVGEHGTGLSGGQRQRIAIARALMTDPRVLI
FDEATSALDYESEAVIQANMRDICARRTVLIIAHRLSAVRDADRILVMDRGQIVESGTHDTLLRIREGIYAHLYSLQQGG
RDVAEARI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 53
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 53
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_5003 YP_001778623.1 type I secretion system ATPase VFG1269 Protein 0.0 64
Bcenmc03_5003 YP_001778623.1 type I secretion system ATPase VFG1557 Protein 0.0 53
Bcenmc03_5003 YP_001778623.1 type I secretion system ATPase VFG1501 Protein 0.0 53
Bcenmc03_5003 YP_001778623.1 type I secretion system ATPase VFG0907 Protein 0.0 53
Bcenmc03_5003 YP_001778623.1 type I secretion system ATPase VFG0841 Protein 0.0 52