Gene Information

Name : CLD_2520 (CLD_2520)
Accession : YP_001781668.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2256201 - 2256497 bp
Length : 297 bp
Strand : -
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGAGATACTATGGAAATGAGGCTCTAGGCCTTGTGGAAACAATAGGATTAGTTCCTGCACTTGAGGCTGCAGATAAAAT
GCTTAAGGCGGCTAATGTTGAATTAATTTCCTATGAAAATATTGGTTCAACTCTTGTAACTATTATGGTAAAAGGGGATG
TTGGTGCAGTAAAGTCTGCTGTAGAAGCAGGTGCTGAAGCAGCTAGAGCTATCGGTAAATTAACAGCACACAATGTTATG
CCACGTCCTATTAGAGAAGTTGGAGATATTGTTTCAGTACACGATATCGATTCATAA

Protein sequence : 
MRYYGNEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEAARAIGKLTAHNVM
PRPIREVGDIVSVHDIDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_2520 YP_001781668.1 microcompartments family protein VFG1596 Protein 2e-12 63
CLD_2520 YP_001781668.1 microcompartments family protein VFG1597 Protein 1e-11 61
CLD_2520 YP_001781668.1 microcompartments family protein VFG1598 Protein 2e-11 58