Name : HSM_0723 (HSM_0723) Accession : YP_001784061.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 831152 - 833101 bp Length : 1950 bp Strand : + Note : TIGRFAM: cytochrome C biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: hso:HS_0398 cytochrome C biogenesis protein F DNA sequence : ATGATCGCTGAATTAGGCAATTATGCTCTGGCTTTAAGTTTAGCTATTTCTGTTTTATTATCTATTTTTCCATTATGGGG AGCGGAAAAAGGCAATGTACAGATGATGGCTTTAGCTCGCCCAATGACCTATGGTTTATTTGTTAGCTTAACTGTTTCTT TTGTTGCACTTTTCTATTTATTTCTGACAAATGATTTTTCAGTACAATATGTGGTGAACAATTCAAATACCAACTTACCT TTGCAATATCGTCTATCCGCTGTTTGGGGCTCCCACGAAGGTTCTTTATTACTTTGGATTTGGCTATTGACTCTTTGGAG TGCGGCTGTGGCTTTTTTGAGTAAACAATTACCCCAAGAAGCTGTGGCTCGTGTCTTGGCAATTATGGGTATTATTACGA TTGGTTTCTTACTATTTGTGATGTTTACTTCTAACCCTTTTGACCGCACTTTCCCTGATTTTCCTGTTGAGGGAAGAGAA TTAAATCCATTATTACAAGATATTGGTCTGATTTTTCATCCGCCTTTACTTTACATGGGCTATGTGGGTTTTTCCGTTGC TTTTGCTTTTGCTATTGCATCATTGATGACGGGAAAACTGGATACCGCATGGGCAAGATGGTCCCGACCTTGGACAATGG CTGCTTGGGTATTTCTAACATTGGGGATTGTGCTGGGATCTTGGTGGGCATATTACGAACTTGGCTGGGGCGGTTGGTGG TTCTGGGATCCTGTAGAAAACGCCTCTTTAATGCCTTGGCTTGCCGGTACTGCATTGCTTCATTCTCTTGCGGTAACGGA AAAACGTGGTTCATTTAAAGCATGGACAGTATTGCTGGCAATCTTGGCTTTTTCACTGTGTTTATTAGGTACTTTTTTGG TTCGTTCTGGTATTTTGGTTTCGGTGCATGCTTTTGCCTCTGACCCAACTAGAGGTTTATATATTTTAGCTTATTTAATT GTAGTTATTGGCGGTTCGCTAGCGTTATACGCTTATAAAGGCAATCTTATTCGCACAAGAAACAATGCTGAACGTTATTC TCGAGAAACTATGTTGTTAATCAATAATATTTTATTAATGACCGCACTTAGTGTGGTGTTCTTGGGTACTCTCCTGCCTT TAGTACACAAACAATTAGGGTTGGGAACTATTTCTATCGGCTCTCCATTTTTTGATCAAATGTTTTTATTGATCATGATC CCTTTATCACTTTTATTGGGTGTCGGACCTTTAGTAAAGTGGCGTCGAGACCAATTCTGTGCTATTCGTCTTCCGGTTAT CATCAGTTTAGTCATTATGCTTATTACCGGATTTGTTTTACCTTATTTTTTACAAGATCGTATTACAGTGAGTGCCGTTC TTGGTGTCATGATGGCAATGTTTATTCTTCTTCTAGCACTCTATGAATTGCAGCAAAGAGCAACGCATAAGCATAGCTTT TGGATTGGCATAACAAAATTGTCTCGTTCTCATTGGGGAATGGTTTTAGCACATTTAGGGGTTGCGATGACGATATGGGG AATTGCTTTTAGCCAAAATTACAGTATTGAAAGAGACGTTCGAATGAATGTGGGGGATACAGTAAAAATTGCAGATTATG AATTTACTTTCCAAGGTATATCCGATGTCAATGGTGTCAATTACTTAGGCGGAAAGGCACAAATTGACATCAGTCGAAAC GGTAAGTTTGAAACCACGTTGTTTGCTGAAAAACGTTTCTATACAGTGAGTAAAATGACAATGACTGAAGCGGCTATTGA TTGGGGGTTATCTCGAGATCTATATGTTGCACTGGGCGAAAGTTTAAATGATGGTTCATGGGCTTTACGCTTGTATTATA AACCTTTTATTCGTTGGATTTGGCTGGGAGGTATATTTATGGCATTCGGCGGATTACTCTGTATATTTGACCGACGTTAT CGTTTTGGAAAACTTCTAAAACAAGGATAA Protein sequence : MIAELGNYALALSLAISVLLSIFPLWGAEKGNVQMMALARPMTYGLFVSLTVSFVALFYLFLTNDFSVQYVVNNSNTNLP LQYRLSAVWGSHEGSLLLWIWLLTLWSAAVAFLSKQLPQEAVARVLAIMGIITIGFLLFVMFTSNPFDRTFPDFPVEGRE LNPLLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYILAYLI VVIGGSLALYAYKGNLIRTRNNAERYSRETMLLINNILLMTALSVVFLGTLLPLVHKQLGLGTISIGSPFFDQMFLLIMI PLSLLLGVGPLVKWRRDQFCAIRLPVIISLVIMLITGFVLPYFLQDRITVSAVLGVMMAMFILLLALYELQQRATHKHSF WIGITKLSRSHWGMVLAHLGVAMTIWGIAFSQNYSIERDVRMNVGDTVKIADYEFTFQGISDVNGVNYLGGKAQIDISRN GKFETTLFAEKRFYTVSKMTMTEAAIDWGLSRDLYVALGESLNDGSWALRLYYKPFIRWIWLGGIFMAFGGLLCIFDRRY RFGKLLKQG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-153 | 63 |
ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-132 | 53 |