|
Name : gap (CLK_0538) Accession : YP_001786486.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : glyceraldehyde-3-phosphate dehydrogenase, type I Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.- Position : 1264736 - 1265752 bp Length : 1017 bp Strand : + Note : identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534 DNA sequence : ATGGGTATAAAAGTTGGACTAAATGGTTTTGGAAGAATAGGAAGAGCAGTATTAAGAATAGCACAGGACAAGTTCCCAGA AGATGTAGAAATAGTAGCATTAAATGCGAGAGCCACTACTGAAACATTAGTACATCTATTTAAATACGACTCCTGCTACG GAAGATTTAATGGAGAAGTGGAAATGATTTCTAATGATAAAATGAAAGTAAATGGAAAAGAAATAAAAATATTTAGAGAA AATGATCCTCAAAATTTACCGTGGAAAGAACTTGGAGTAGATATAGTTATAGAATCTACAGGAATATTTAAAGATAGAGA AAAAGCTATGAAGCATATAGAAGCTGGAGCTAAAAAAGTTATAATAACAGCACCAGGAAAAAATGAAGATATAACTATAG TTTTAGGAGTAAATGAAAATGAATATAATCCAGAAGAGCATAATATAATTTCAAATGCATCTTGTACTACAAATTGTTTA GCTCCTTTTGCTAAAGTACTTGACGATAATTTTGGTATAGTTAGAGGTTTAATGACAACAGTACATTCTTATACAAATGA CCAAAGAATATTAGATAAAACTCATAAAGATTTAAGAAGGGCAAGAGCTGCAGGAGAATCAATAATACCAACTACTACAG GAGCTGCAAAGGCAGTAGCTAAAGTATTACCTAGTCTTAAAGGTAAATTAAATGGATTTGCTTTAAGAGTTCCGACCCCA ACAGTATCTTTAACAGATTTAGTTTGTGAATTAAAAACTAAAGTAACTGCTGAAGAAATTAATGAAGCGTTTAAAAAAGC AGCAGAGGGCGAAATGAAGGGTATTTTAGGATATTCAGAAGAACCACTAGTTTCAGTAGATTACAAGGGAGATCCAAGAT CCTCTATAGTGGATGGATTATCTACTATGGTCTTAGAAGACGACATGGTTAAAGTTGTGTCTTGGTATGATAATGAATGG GGATACTCATGTAGAACTGTAGATTTAGTTAATTATGTAGCTAAATTTATGAAATAA Protein sequence : MGIKVGLNGFGRIGRAVLRIAQDKFPEDVEIVALNARATTETLVHLFKYDSCYGRFNGEVEMISNDKMKVNGKEIKIFRE NDPQNLPWKELGVDIVIESTGIFKDREKAMKHIEAGAKKVIITAPGKNEDITIVLGVNENEYNPEEHNIISNASCTTNCL APFAKVLDDNFGIVRGLMTTVHSYTNDQRILDKTHKDLRRARAAGESIIPTTTGAAKAVAKVLPSLKGKLNGFALRVPTP TVSLTDLVCELKTKVTAEEINEAFKKAAEGEMKGILGYSEEPLVSVDYKGDPRSSIVDGLSTMVLEDDMVKVVSWYDNEW GYSCRTVDLVNYVAKFMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 3e-65 | 45 |
