Gene Information

Name : CLK_1560 (CLK_1560)
Accession : YP_001787497.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduL-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 2378440 - 2379090 bp
Length : 651 bp
Strand : -
Note : identified by match to protein family HMM PF06130

DNA sequence :
ATGGATAATTGTGAAGAAGTATTAAAACTTTTACTAGAAGCTGTTAAAGGTAAAGAATTAAATAATGCAGTTAATAGAAA
TTCATCTGAGATTCCAGTAGGGATTTCTAATAGACATATACATCTTTCACAAAAGGATTTAGATAGTCTTTTTGGTGAAA
ATTATGGGCTTACTAAGATCAAAGATTTATCTCAACCTGGACAATATGCTTGCAAAGAAGTTGTAACAATTTGTGGACCA
AAGGGTGCAATTGAAAAAATTAGAATCTTAGGTCCTGTAAGAAGCAAGACTCAGGTTGAAGTATTAGCAGGAGACTGCAT
TAAGCTTGGAGCAGTATCCCATGTAAAATTATCTGGAGATTTAAATAGAACATCTCCTATTACAATAGTTGGACCAAAGG
GTTCTGTGCAATTAGAAGAAGGATTAATAGTTGCACAAAGACACATTCACATGACACCTGAAGACGCTAAAAATTTAGGA
GTACATGATGGAGAAATAGTGTCAATAAAATTTGAAGATCTAAGAGGCGGAATATACAATAATGTAGCTGTTAGAGCTAA
TGACGCTTCAAGCCTTGAATGTCATCTTGATATTGAAGAAGCTAACGCAATGGGTATTAATTCAAAGTCAAAAGTAACAA
TAGTAAAGTAA

Protein sequence :
MDNCEEVLKLLLEAVKGKELNNAVNRNSSEIPVGISNRHIHLSQKDLDSLFGENYGLTKIKDLSQPGQYACKEVVTICGP
KGAIEKIRILGPVRSKTQVEVLAGDCIKLGAVSHVKLSGDLNRTSPITIVGPKGSVQLEEGLIVAQRHIHMTPEDAKNLG
VHDGEIVSIKFEDLRGGIYNNVAVRANDASSLECHLDIEEANAMGINSKSKVTIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 4e-41 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_1560 YP_001787497.1 propanediol utilization protein PduL-like protein VFG1589 Protein 2e-41 46