Gene Information

Name : CLK_1573 (CLK_1573)
Accession : YP_001787510.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2390551 - 2390859 bp
Length : 309 bp
Strand : -
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGGCAAGATATGAAGCTTTAGGATTAATCGAAACTTTTGGTCTGGTTTTTGCTTTAGAAGCAGCAGACGCTATGTGCAA
ATCAGCAGATGTTGAACTTATAGGATATGAAAATGTTGCATCAGGTTATATATCTGTATTAGTTCGTGGTGATGTTGGTG
CTTGTAAAACAGCAGTAGATGCTGGTGTTGCAGCAGTTAATGGAATGGAAGGTGGAAGCCTATATAGCTCAATAGTTATT
CCAAGACCACATGAAGATCTTGAAAAAATAATAAAACGTTATGCCATTACAGATCTTATAACAGAATAG

Protein sequence : 
MARYEALGLIETFGLVFALEAADAMCKSADVELIGYENVASGYISVLVRGDVGACKTAVDAGVAAVNGMEGGSLYSSIVI
PRPHEDLEKIIKRYAITDLITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-21 60
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-19 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-19 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_1573 YP_001787510.1 microcompartments family protein VFG1597 Protein 2e-21 60
CLK_1573 YP_001787510.1 microcompartments family protein VFG1596 Protein 4e-19 60
CLK_1573 YP_001787510.1 microcompartments family protein VFG1598 Protein 1e-19 56