Gene Information

Name : CLK_1954 (CLK_1954)
Accession : YP_001787887.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Unknown
Product : rrF2 family protein
Function : -
COG functional category : K : Transcription
COG ID : COG1959
EC number : -
Position : 2769194 - 2769640 bp
Length : 447 bp
Strand : -
Note : identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738

DNA sequence :
ATGAAGTTGTCAACTAAGGGTAGGTATGGAGTAAAGGCTATGGTAGATTTGGCAATTAACTACGGTGGGCAACCAGTTTC
TATAAAAAATATTTCAGAAAGGCAACATATATCTGAGTATTATTTAGAACAACTATTTTCCCCACTTAGAAAGGCTAAAC
TTATAAAAAGCATAAGGGGAGCTCAAGGGGGCTATATTTTAAATAGGCATCCTAAGGATATAACTGTGGCAGATATTATG
GAAGTTTTAGAAGGCCCTATAGAAATATCCAGTTGTTTAGAGGGAGAGGATAGTTGTAGTAATATGGATTGTTGTGCAAC
TAGACTTTTGTGGGCAAAGATAAAGGAAAGTCTAGATAATATAATGGAATCAACTACCTTACAAGACATGGTAGAAGACT
ATAAGAAAATAAATTCACCAATTAAAAGGAGTGAAAATAATGAATAA

Protein sequence :
MKLSTKGRYGVKAMVDLAINYGGQPVSIKNISERQHISEYYLEQLFSPLRKAKLIKSIRGAQGGYILNRHPKDITVADIM
EVLEGPIEISSCLEGEDSCSNMDCCATRLLWAKIKESLDNIMESTTLQDMVEDYKKINSPIKRSENNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96061.1 rrf2 family protein Not tested T-PAI Protein 1e-26 42