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Name : Lcho_1041 (Lcho_1041) Accession : YP_001790075.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 1111587 - 1112312 bp Length : 726 bp Strand : - Note : KEGG: mpt:Mpe_A2256 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease DNA sequence : ATGCGCCAGATCTTTCTCGACACCGAAACCACCGGCCTGAGCCATGAGAGCGGCGACCGTGTCGTCGAACTGGGCTGCGT GGAGATGGTCAACCGCCGCCTGACCGGGCGCAACCTGCACCACTATTTCAACCCGCAGCGTGCCAACCACGAAGAGGCCG TGCGTGTCCACGGCCTGACGGACGCGTTCCTGGCGGACAAACCGTTGTTCAGCGCCGTGGCGCAGGAGTTCGTCGACTTC GTGCGCGATGCGGAAATCATTGCCCACAACGCGAACTTCGACGTCGGCTTCCTCGATGCCGAACTCAAGCGCATCGGCCA CCCGCCGCTCAAGCAACTGGTCGACAAGGTCACCGACTCGCTGGTGATGGCGCGCGAGCAGTTTCCTGGCAAGGCCAACT CGCTGGACGCCTTGTGCAGGCGACTCGAAGTCGACAACACCAGCCGCACGGTGCACGGCGCCTTGCTCGACGCCGGCCTG CTGGCCGAGGTCTACATCCGGATGACCCGCGGGCAGAACTCGCTGGTGATCGACGACAGTCCGGTGCAATCTGAACAACA AGTCGAACAACCGCTGATCGCTGTCGATCTGACGGCTTTCGTGCTGCCTGTGCTGGTCGCTGAAGACGAAGAGATCGCCG CTCACGAGGCGGTGTTGTCCGGGCTCGACAAATCCAGCGGCGGAAAAACCCTTTGGCGCTCGATAGGGGCTAGCGTTCAA GTTTGA Protein sequence : MRQIFLDTETTGLSHESGDRVVELGCVEMVNRRLTGRNLHHYFNPQRANHEEAVRVHGLTDAFLADKPLFSAVAQEFVDF VRDAEIIAHNANFDVGFLDAELKRIGHPPLKQLVDKVTDSLVMAREQFPGKANSLDALCRRLEVDNTSRTVHGALLDAGL LAEVYIRMTRGQNSLVIDDSPVQSEQQVEQPLIAVDLTAFVLPVLVAEDEEIAAHEAVLSGLDKSSGGKTLWRSIGASVQ V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 1e-48 | 50 |
