Gene Information

Name : Lcho_1048 (Lcho_1048)
Accession : YP_001790082.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : BadM/Rrf2 family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1959
EC number : -
Position : 1117226 - 1117759 bp
Length : 534 bp
Strand : -
Note : TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mpt:Mpe_A2263 hypothetical protein

DNA sequence :
ATGAGATTGACGACCAAGGGACGATTTGCAGTCACTGCAATGATCGATCTGGCTTTGCGCGAGCACACGGGGCCTGTGGC
CTTGGCTGCGATCAGTGCGCGACAGCAGATTTCTCTGTCCTACCTCGAGCAGCTGTTTGGCAAGCTTCGGCGCCATGAGC
TGGTCGAGAGTACGCGGGGGCCGGGTGGTGGTTATTCGCTTGGCCGCAAGGCCGAAGACATCACGGTGGCCGACATCATC
GTGGCGGTCGACGAGGCGATCGACTCGACCGGTTGCGGCGGTGGCGAAAACTGCATGGGCGACGACACCGGTCGCTGCAT
GACCCACGATCTTTGGACCAGCCTGAACGCCAAGATGCTGGAGTACCTGCACTCCATCTCGCTGCGAAGCCTGGTCCAGG
ACCAGCTCTCGCGCGGCGTCTCGGTGGAAGAAGCGCCCATCAAGCGTGCGATCTCGACCCAGCCGGTGGTCAAGCCGATC
AAGATCACGGCACCGAATTCGGTGTTCGCGCTCGGCATCGCGCTGTCGAAGTGA

Protein sequence :
MRLTTKGRFAVTAMIDLALREHTGPVALAAISARQQISLSYLEQLFGKLRRHELVESTRGPGGGYSLGRKAEDITVADII
VAVDEAIDSTGCGGGENCMGDDTGRCMTHDLWTSLNAKMLEYLHSISLRSLVQDQLSRGVSVEEAPIKRAISTQPVVKPI
KITAPNSVFALGIALSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96061.1 rrf2 family protein Not tested T-PAI Protein 3e-36 60