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Name : Lcho_1170 (Lcho_1170) Accession : YP_001790204.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : FAD linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 1252174 - 1253763 bp Length : 1590 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; biotin/lipoate A/B protein ligase; KEGG: mpt:Mpe_A3638 putative glycolate oxidase (FAD-linked subunit) oxidoreductase protein DNA sequence : ATGCAAAGCCCCGCACCCTGCGACACGACGGGTGGATCGACCGGCAGCCTGACCGCGCTGGTCCAGGCCGACAACGCGAC GGCTTCGTCACGCGAAACGAAACAGGCGCTACTGGCGCAGGAGCAGCTGCGCGCCGCCCGCCAGGCCGAGGTGCTCGCCG CCCTGCGCGGCGTGCTGCCCGCCAGCAGCCTGCTGAGCCGCAACGAGGACACCACGCCCTACGAATGCGACGGCCTGACC GCCTACCGCCAGCGCCCGATGCTGGTGGTGCTGCCCGAGACCGACGCCCAGGTGGCCGCGGTGCTGCGCACCTGTCACGC GCTGGGCGTGCCTGTGGTGGCGCGCGGCGCGGGCACGGGCCTGAGCGGCGGCGCGATGCCGCACGCGCTGGGCGTGACGA TGTCGCTGGCGCGCTTGAACAAGATCGTCCAGCTCGACGCCGAAGCCGGTTTTGCGGTGGTGCAGTGCGGCGTGCGCAAC CTCGCCATCAGCGAGGCCGCCGCGCCGCACGACCTGTATTACGCGCCCGACCCGAGCAGCCAGATCGCCTGCACCATCGG CGGCAACGTGGCCGAGAACTCCGGCGGCGTGCACTGCCTCAAGTACGGCCTGACGCTGCACAACGTGCTGCAGGTCAAGG GCTACACCGCAGCGGGTGAGCCGATCACCTTCGGCTCGCTGGCCTCCGACGCGCCCGGGCTCGACCTGCTGAGCGTGGTG GTCGGCAGCGAGGGCATGCTGGCGGTGGTCACCGAGGTGACGGTCAAGCTGATCCCCAAGCCGGCGCTGGCGCGCTGCAT CATGGCCAGCTTCGCGAGCGTGGAGGCGGCCGGCGAGGCGGTGGCCGCGGTGATCGCCGCCGGCATCATTCCGGCCGGGC TGGAGCTGATGGACCAGCGCATGACCGCGGCGGTCGAGGACTACGTGCACGCCGGTTACGACCTCGACGCCGCCGCCATC CTGCTGTGCGAGAGCGACGGCACGCCCGAGGAGGTGGCCGAGGAGATCGAGCGCATGCGCGAGGTGCTGAGCGGCTGCGG CGCGACCCGGTTGGAGGTCAGCCGCGACGAGGCGCAGCGGCTGCGTTTCTGGAGCGGGCGCAAGAACGCCTTCCCGGCCA GCGGGCGCATCAGCCCCGACTACATGTGCATGGACTCCACCATCCCGCGCAAGCGCCTGGCCGAGATCCTGCGGGCGATC GAGGCGATGGAAGTGACCTACGGGCTGCGCTGCGCCAACGTCTTCCACGCCGGCGACGGCAACCTGCACCCGCTGATCAT GTTCGACGCCAACGACCCCGACCAGCTGCACCGCTGCGAGCGGTTCGGCGCCGACATCCTCGAGACCAGCGTGCGCCTGG GGGGCACGGTGACCGGCGAGCATGGCGTGGGTGTCGAGAAGCTCAACTCGATGTGCGTGCAGTTCTCGCCGCTCGAATTG GCGCAGATGCTGGCGCTGAAATCGGCCTTCGACCCGGCCGGCGTGCTCAACCCCGGCAAGGCGGTGCCCGAGCTGCACCG CTGCGCCGAATACGGGCGCATGCACGTCAAGCGCGGCCTGTTGCCGTTTCCCGAACTGCCGAGGTTCTGA Protein sequence : MQSPAPCDTTGGSTGSLTALVQADNATASSRETKQALLAQEQLRAARQAEVLAALRGVLPASSLLSRNEDTTPYECDGLT AYRQRPMLVVLPETDAQVAAVLRTCHALGVPVVARGAGTGLSGGAMPHALGVTMSLARLNKIVQLDAEAGFAVVQCGVRN LAISEAAAPHDLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTLHNVLQVKGYTAAGEPITFGSLASDAPGLDLLSVV VGSEGMLAVVTEVTVKLIPKPALARCIMASFASVEAAGEAVAAVIAAGIIPAGLELMDQRMTAAVEDYVHAGYDLDAAAI LLCESDGTPEEVAEEIERMREVLSGCGATRLEVSRDEAQRLRFWSGRKNAFPASGRISPDYMCMDSTIPRKRLAEILRAI EAMEVTYGLRCANVFHAGDGNLHPLIMFDANDPDQLHRCERFGADILETSVRLGGTVTGEHGVGVEKLNSMCVQFSPLEL AQMLALKSAFDPAGVLNPGKAVPELHRCAEYGRMHVKRGLLPFPELPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-121 | 61 |
