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Name : Lcho_1549 (Lcho_1549) Accession : YP_001790582.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1643111 - 1645093 bp Length : 1983 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A1211 cytochrome c-type biogenesis protein (CcmF) DNA sequence : ATGATTCCTGAAATCGGCCACTTCATGCTCTGGCTCGCCGTCGGGGTGTCACTGGTGCTGAGCACCGTGCCCCTGGTGGG CGCGCAGCGCGGCCGCTCCGACTGGATGGCGCTGGCGCGGCCGCTGACCTGGCTGCTGTTCGTGCTGGTCTCGATCTCGA TGGTCACGCTCGGCAGCGCCTTCGTCTCGCACGACTTCTCGGTGCTCTACGTCGCCTCGCACTCCAACACGGCGCTGCCG CTGGCCTATCGCATCGCCGGCATCTGGGGCGGCCATGAAGGCTCGCTGCTGCTGTGGCTGCTGATGCTGTGCCTGTGGAT GCTGGCGGTGGCGCAGTTCAGCAAGGAACTGCCGCTGCCGGTGCTGGCGCGCATCCTGGCGGTGATGGGCATGGTCAGCG TGGGCTTCCTGGCCTTCACGCTGATGACGTCGAATCCGTTCGACCGCCTGCTGCCGGCCGCGCTCGAAGGCCGTGACCTG AACCCGCTGCTGCAGGATCCGGGCATGGTGATCCACCCGCCGATGCTCTACATGGGCTACGTCGGCTTCTCGGTGGCGTT CGCGTTCGCGATCGCGGCGCTGATCGGCGGCAACCTCGACGCCCAGTGGGCGCGCTGGAGCCGGCCCTGGACCACCGCCG CCTGGGCGTTCCTGACGATCGGCATCGCGCTCGGTTCCTGGTGGGCGTATTACGAACTGGGCTGGGGCGGCTGGTGGTTC TGGGATCCGGTCGAAAACGCCTCCTTCATGCCGTGGCTGGTCGGCACCGCGCTGATCCACTCGCTGGCGGTGACCGAAAA GCGCGGCAGCTTCAAGAACTGGACCGTGCTGCTGGCGATCATGGCGTTTTCGCTGTCGCTGGTCGGTACCTTCCTGGTCC GCTCGGGCGTGCTGTCGTCGGTGCACGCGTTTGCCACCGACCCGGCCCGCGGCCTGTTCATCCTCGGTTTCCTGGTGGTG GTGATCGGCGCTTCGCTGACGCTCTACGCCTGGCGTGCCCCGAGCGTCGGACTGGGCGCGCGTTTCGGCCTGATGTCGCG CGAGACGCTGCTGCTGGGCAACAACGTGCTGCTGGTCGTGGCCACCGGCGCGGTGCTGCTGGGCACGCTCTACCCGTTGG CGCTCGACGCCCTGAACATGGGCAAGATCTCGGTCGGCCCGCCGTACTTCGACACCGTCTTCATGCCGCTGATGGCGCCG CTGGTGTTCTTGATGGGCGTGGGCCCGATGGCGCGCTGGAAGCAGGCCGAGGTGCCCGACCTGGCGCGCCGCCTGAGCTG GGCCGCCGGCGTCACGGTGGTGGCCGCGCTCGGCAGCGGCTGGCTGGCCGGCGAGATCACGCTGGTCACGACCGCCGGCC TGCTGATGGGCTGGTGGGTGGTGACCTCGGTGGCCACCGACCTGTGGGAGAAGATCCGCCCGCTGCCCGGCGTGGCCACG ACCCGCCAGCGCGCGGCTCAGCTGCAGCGTGCCACCGTCGGCATGATGGTGGCCCACCTGGGCGTGGCGGCGTTCATCTT CGGCGTCGCGCTGGTCAAGGGTTACGAGGTCGAACGCGACGTGCAGATGAACCTGGGCGACACCACCACGGTGGCCGGCT ACACCTTCACCTTCCTGGGCGTGCGTGAAGTGCAGGGCCCCAACTATGCGGCGGCACAAGGCCAGATCAAGGTCACCAGG AACGGCCAGACCGTGGCCGAGATGCACCCCGAGAAGCGCGTCTACCGCGTGCAGCGCAACCCGATGACCGAGGCGGCCAT CCGCAGCGGTTTCACCGGTGACCTGTACGTCTCGCTCGGCGAGCCGGTGGCCGGCAGCGACGCCTGGATCGTGCGCGTCT ACGTCAAGCCCTTCGTCAACTGGATCTGGGGCGGCTGCTTCCTGATGGCCCTTGGCGGCGTGCTCGCCATGACCGACCGG CGCTATCGCCGCGCCACCCGTGAAGCCGCTGCACGTGCCGACCTGCAAGGAGCCCAGGCATGA Protein sequence : MIPEIGHFMLWLAVGVSLVLSTVPLVGAQRGRSDWMALARPLTWLLFVLVSISMVTLGSAFVSHDFSVLYVASHSNTALP LAYRIAGIWGGHEGSLLLWLLMLCLWMLAVAQFSKELPLPVLARILAVMGMVSVGFLAFTLMTSNPFDRLLPAALEGRDL NPLLQDPGMVIHPPMLYMGYVGFSVAFAFAIAALIGGNLDAQWARWSRPWTTAAWAFLTIGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALIHSLAVTEKRGSFKNWTVLLAIMAFSLSLVGTFLVRSGVLSSVHAFATDPARGLFILGFLVV VIGASLTLYAWRAPSVGLGARFGLMSRETLLLGNNVLLVVATGAVLLGTLYPLALDALNMGKISVGPPYFDTVFMPLMAP LVFLMGVGPMARWKQAEVPDLARRLSWAAGVTVVAALGSGWLAGEITLVTTAGLLMGWWVVTSVATDLWEKIRPLPGVAT TRQRAAQLQRATVGMMVAHLGVAAFIFGVALVKGYEVERDVQMNLGDTTTVAGYTFTFLGVREVQGPNYAAAQGQIKVTR NGQTVAEMHPEKRVYRVQRNPMTEAAIRSGFTGDLYVSLGEPVAGSDAWIVRVYVKPFVNWIWGGCFLMALGGVLAMTDR RYRRATREAAARADLQGAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-154 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-130 | 56 |
