Gene Information

Name : Lcho_1662 (Lcho_1662)
Accession : YP_001790694.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1771420 - 1771659 bp
Length : 240 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mpt:Mpe_A2463 putative cold shock protein

DNA sequence :
ATGCCGCGCGGGATCGTCAAATGGTTCAATGACGTCAAGGGGTTTGGTTTCATTGAGCCTGAGGAGGGTGGAGAAGACGT
GTTTGCGCACTTTTCAGCCATCCAGATGGAGGGTTTCCGCACGCTCAAGCAGGGATCGTCGGTCGATTTCGACCTGGTCG
ACGGCCCCAAGGGCAAGCTGGCGCAGAACATCCGCGCCAACCAGATCGCCGCCGGTGAAGTGCCGGCAAGCCCAAGCTGA

Protein sequence :
MPRGIVKWFNDVKGFGFIEPEEGGEDVFAHFSAIQMEGFRTLKQGSSVDFDLVDGPKGKLAQNIRANQIAAGEVPASPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-06 55