Gene Information

Name : Lcho_2599 (Lcho_2599)
Accession : YP_001791629.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : transcriptional regulator CysB-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2845094 - 2846059 bp
Length : 966 bp
Strand : +
Note : PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1946 transcriptional regulator CysB-like protein

DNA sequence :
ATGAACCTGCACCAGTTCCGCTTCGTGCAGGAGGCCGCGCGCCGCAACCTCAACCTGACCGAAACCGCCAAGGCGCTGCA
CACCTCGCAGCCTGGCATCTCGAAGGCCATCCTCGAACTCGAGGAAGAGCTCGGCGTCGACATCTTCGTGCGCCACGGCA
AGCGCCTCAAGCGCATCACCGAGCCGGGCCAGCAGGTGCTGAAGTCGATCGAGGTGATCATGCGCGAGGTCGTCAACCTC
AAGCGCATCGGCGACGACTTCTCGCTGCAGGACGTCGGCACGTTGTCGATCGCAGCCACCCACACGCAGGCCCGTTACGT
GCTGCCGGCGCCGGTGGCGGCGCTGCGCAGCAGCTACCCGAAGGTCTCGGTCAGCCTGCACCAGGGCACGCCCGACCAGG
TGGCGCAGATGGTGCTCGACGACGCCGCCGAAGTGGGCATGGCGACCGAGCGCCTGATGCAGTACGAAGACCTCGTCACG
CTGCCGTGTTACGAGTGGCGCCACGTCGCGGTGATGCCGGCCGACCACCCGCTGGCGCTGGTCGAGCGCATCAGCCTGGA
ACAGCTCGCACACGAACCGCTGATCTCCTACCACCCGTCGTTCACCGGCCGCAGCAAGATCGACGCGGCCTTCGAGGCGC
GCAACCTCAAGCCGCAGATCGCGCTCGAGGCGATCGACTCCGACGTCATCAAGACCTACGTGCGCCTGGGCCTGGGCGTG
GGCATCGTGGCCGAGATGGCGGTGCGCGACGACCCGATCTGCGGCCCCGGCGGCGAGCTGGTGGCCCGGCCGGTGGGGCA
CCTGTTCGGCCCCAGCGTGGCGCGCATCGCCTTCAAGCGCAGCGCCTACCTGCGTCACTTCGTCTATGCGTTTGCCGAGC
TGCTGTCCGAGCGGCTGTCGCGCGCCCTGATCATGCGGGTGATGCAAGGCTCGACCGAAAGCGGCAACGCCGCCGACGCC
ATGTGA

Protein sequence :
MNLHQFRFVQEAARRNLNLTETAKALHTSQPGISKAILELEEELGVDIFVRHGKRLKRITEPGQQVLKSIEVIMREVVNL
KRIGDDFSLQDVGTLSIAATHTQARYVLPAPVAALRSSYPKVSVSLHQGTPDQVAQMVLDDAAEVGMATERLMQYEDLVT
LPCYEWRHVAVMPADHPLALVERISLEQLAHEPLISYHPSFTGRSKIDAAFEARNLKPQIALEAIDSDVIKTYVRLGLGV
GIVAEMAVRDDPICGPGGELVARPVGHLFGPSVARIAFKRSAYLRHFVYAFAELLSERLSRALIMRVMQGSTESGNAADA
M

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 8e-61 45