|
Name : Lcho_4274 (Lcho_4274) Accession : YP_001793290.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : transketolase domain-containing protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3959 EC number : - Position : 4782621 - 4783484 bp Length : 864 bp Strand : + Note : PFAM: Transketolase domain protein; KEGG: pol:Bpro_1461 transketolase-like DNA sequence : ATGACGACGACAACCGCTGAACGGGCCGAACTGGCCGAGCTTCGACAAGTGGCCTACCGCATCCGCCGCAATGCCTTGCG CATGGGCGAGGTGCAGGGCCAGGGCTACATCGGCCAGGCGCTGGGCTGGGCCGACGTGCTGGCGGTGGCCTACGGCCACG CACTCAACCTGCGCCCCGACGAACCCGAATGGGAGGGCCGCGACCGCTTCCTGCTCTCGCACGGCCACTACGCGATCGCG TCCTACGCCGCGCTGATTGAGGCCGGCATCATCCCCGAGAGCGAACTCGAAACCTACGGCAGCGACGACAGCCGCCTGCC GATGTCGGGCATGGCGACCTACACGCCCGGCATGGAGATCTCGGGCGGCTCGCTGGGCCAGGGCCTGGCGATCGGCGTGG GCATGGCGCTGGGCCTGAAGCACAAGAAGAACCCGGCCTTCATCTACAACTCGATGTCCGACGGCGAGCTCGACGAGGGC GCGGTCTGGGAGGCCGCGATGGGTGCCGCGCACCACCGCCTGGACAACCTGATCTGCCTGATCGACATCAACAACCAGCA GGCCGACGGCCCGTCGTCGAAGGTGATGGGCTTCGAGCCGCTGGCCGACAAGTGGGCCGCCTTCGGCTGGCACGTGCAGC GTGTCGACGGCAACGATCTGGCGGCGGTGCTGGAGGCCTTCGACGCCGCACGCAACCTGACCGAAGCCAAGCCGCGCGTG ATCCTGTTCGACACGCTGATGGGCAAGGGCGTGCCCTTCCTGGAGACGCGCGACAAGAACCATTTCATCCGCGTCGACCC GCCGGAGTGGCAGCAGGCCCTGCAGATCCTGGATCAATCGCAAGCTGAAGGAGCGCAAGCATGA Protein sequence : MTTTTAERAELAELRQVAYRIRRNALRMGEVQGQGYIGQALGWADVLAVAYGHALNLRPDEPEWEGRDRFLLSHGHYAIA SYAALIEAGIIPESELETYGSDDSRLPMSGMATYTPGMEISGGSLGQGLAIGVGMALGLKHKKNPAFIYNSMSDGELDEG AVWEAAMGAAHHRLDNLICLIDINNQQADGPSSKVMGFEPLADKWAAFGWHVQRVDGNDLAAVLEAFDAARNLTEAKPRV ILFDTLMGKGVPFLETRDKNHFIRVDPPEWQQALQILDQSQAEGAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96177.1 | transketolase | Not tested | T-PAI | Protein | 3e-87 | 70 |
| unnamed | AAT96117.1 | transketolase | Not tested | T-PAI | Protein | 2e-87 | 70 |
| unnamed | AAT96229.1 | transketolase | Not tested | T-PAI | Protein | 4e-87 | 70 |
| unnamed | AAT96100.1 | transketolase | Not tested | T-PAI | Protein | 6e-87 | 69 |
| unnamed | AAT96056.1 | transketolase | Not tested | T-PAI | Protein | 4e-87 | 69 |
