Gene Information

Name : rnhA (RALTA_A1997)
Accession : YP_002006001.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Unknown
Product : ribonuclease h
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2123025 - 2123462 bp
Length : 438 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCAAGAAGTCACGATCTACTCCGACGGCGCCTGCAAGGGCAATCCCGGCCGCGGCGGCTGGGGCGCGGTGCTCGTCGC
CGGCACCAGCGAGAAAGAGCTGTTCGGCGGCGAACCGAACACCACCAACAACCGCATGGAAATGACCGCCGTGATCGAAG
CGCTGCGCGCGCTCAAGCGGCCCTGCGTGGTGCGCGTCTATACCGACTCCCAGTACGTGCAAAAGGGCATCAGCGAATGG
CTGCCCGGCTGGAAGGCGCGCGGCTGGAAGACCGCCGACAAGAAGCCAGTCAAGAATGCCGACCTGTGGCAGGCGCTGGA
CACCTTGGCGCAAGCGCACCAGATCTCCTGGCACTGGGTACGCGGCCACAACGGCCACCCCGGCAACGAGCGCGCCGACG
CGCTGGCCAACCGCGGCGTCGAATCGATCGGCCGCTGA

Protein sequence :
MQEVTIYSDGACKGNPGRGGWGAVLVAGTSEKELFGGEPNTTNNRMEMTAVIEALRALKRPCVVRVYTDSQYVQKGISEW
LPGWKARGWKTADKKPVKNADLWQALDTLAQAHQISWHWVRGHNGHPGNERADALANRGVESIGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-31 52