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Name : secD (RALTA_A2590) Accession : YP_002006582.1 Strain : Genome accession: NC_010528 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2743991 - 2745862 bp Length : 1872 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTATCCGCTTTGGAAATACCTCGTGATCCTGGTGGCCCTGGCCATCGGCATCATCTACACCTTGCCGAACTT CTTCGGCGAGGCGCCTGCCGTGCAGGTGTCCTCGGGCAAGGCCACGGTCAAGGTCGACCTGTCGATGCAGAAGCAGGTCG AAGAGATCCTGGCGCAGAACCAGCTGCAGCCCGACGGCGTCTTCTTCGATATTTCCGGCCAGTCGGGCTCGGTCAAGGCG CGCTTCCGCACCACCGACGAGCAGCTCAAGGCCAAGGACGTGCTGTCGCGCGCGCTGAACCCGGACGCATCCGACCCCGC CTACGTGGTCGCGCTGAACCTGTTGTCGGGCTCGCCGCGCTGGCTGACCTCGCTGCACGCGCTGCCGATGTACCTGGGCC TGGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTCGACATGAAGGGCGCGGTCGACAAGAAGCTCGACAGCCTGGCC GGCGACGCGCGCACGCTGCTGCGTGACAAGAACATCCGCCACGGCGGCATCGACCGCGACGGCGAACGCCTGACGGTGCG CTTCAACAATGCCGACGATGCCAGCCGCGCCCGCACGCTGCTGGCCGACAACGTGCGCGAAGTGGCCTTCGCCATGGACG GCAACAACATCGTCGGCACCTTCACCGAGGCCGCCCGCCGGGCCGTCCAGGACGCCGCGGTCAAACAGAACATCACCACC CTGCACAACCGCGTCAACGAGCTCGGCGTGGCCGAGCCGGTGATCCAGCAGCAAGGCGCCGACCGTATCGTGGTGCAGCT GCCGGGCGTGCAGGACACCGCCAAGGCCAAGGACATCATCGGCCGCACCGCCACGCTGGAAGCGCGCCTGGTCGACAACG ACGCGCCGCGCAGCCCGCGTCCGGGCGACCCGATCCCGTTCGGCAGCGAGCTGTTCACGCAAGGCAACGGCGCCCCGGTG GTGCTGAAGAAGCAGGTCATCTTCACCGGCGACCGCATCGAAAGCGCCTCCGCCGGCTTCGACCAGAACCAGCAGCCTTC GGTCAATATCAAGCTCGACGCCCAGGGCGGCCGCGTGCTGCGCGACGTCTCGCGCGAGAACCTGAAGAAGCCGATGGCGA TCGTGCTGTTCGAAAAGGGCAAGGGCGAAGTGCTGACGGTGGCGACGATCCAGTCCGAACTGGGCTCGAGCTTCCAGATC ACCGGCTCCTACTCCACCGAGGCCGCCAACGACCTGGCCCTGCTGCTGCGCGCCGGCTCGCTGGCCGCGCCGATGGAGAT CATCGAGGAACGCACCATCGGCCCGTCGCTGGGTGCCGACAACATCGAGAAGGGCTTCGATTCGGTCGCCTATGGCTTTG CCGCCATCGGCGTGTTCATGATCCTGTACTACATGCTGTTCGGCGTGTTCTCGGTGATCGCGCTGGGCGTGAACCTGCTG CTGCTGATCGCGGTGCTGTCGATGCTGCAGGCCACGCTGACGCTGCCGGGCATCGCCGCCATCGCGCTGGTGCTGGGCAT GGCCATCGACGCCAACGTGCTGATCAACGAGCGCATCCGCGAAGAACTGCGCGCCGGCGCGTCGCCGCAGATGGCGATCG CGGTCGGTTTCGACCGCGCCTGGGCCACCATCCTGGACTCCAACGTGACCACGCTGATCGCCGGCCTGGCGCTGCTGGCG TTCGGCTCGGGCCCGGTGCGCGGCTTTGCCGTGGTGCACTGCCTGGGCATCCTGACCTCGATGTTCTCGGCGGTGTTCTT CAACCGCGGGCTGGTCAACCTCTGGTACGGCCGCAAGAAGAAGCTGCAGAGCGTGGCCATCGGCCAGATCTGGAAGCCCG GCAATACCACCGACACGCCGGTCGCCAAGTAA Protein sequence : MNRYPLWKYLVILVALAIGIIYTLPNFFGEAPAVQVSSGKATVKVDLSMQKQVEEILAQNQLQPDGVFFDISGQSGSVKA RFRTTDEQLKAKDVLSRALNPDASDPAYVVALNLLSGSPRWLTSLHALPMYLGLDLRGGVHFLLQVDMKGAVDKKLDSLA GDARTLLRDKNIRHGGIDRDGERLTVRFNNADDASRARTLLADNVREVAFAMDGNNIVGTFTEAARRAVQDAAVKQNITT LHNRVNELGVAEPVIQQQGADRIVVQLPGVQDTAKAKDIIGRTATLEARLVDNDAPRSPRPGDPIPFGSELFTQGNGAPV VLKKQVIFTGDRIESASAGFDQNQQPSVNIKLDAQGGRVLRDVSRENLKKPMAIVLFEKGKGEVLTVATIQSELGSSFQI TGSYSTEAANDLALLLRAGSLAAPMEIIEERTIGPSLGADNIEKGFDSVAYGFAAIGVFMILYYMLFGVFSVIALGVNLL LLIAVLSMLQATLTLPGIAAIALVLGMAIDANVLINERIREELRAGASPQMAIAVGFDRAWATILDSNVTTLIAGLALLA FGSGPVRGFAVVHCLGILTSMFSAVFFNRGLVNLWYGRKKKLQSVAIGQIWKPGNTTDTPVAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-95 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-95 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-95 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-95 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-95 | 43 |
