Gene Information

Name : sciG (RALTA_A0607)
Accession : YP_002004659.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Virulence
Product : replication/virulence associated protein; ATP-dependent protease clpa/b chaperone motif
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 626362 - 629100 bp
Length : 2739 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12437215; Product type ph : phenotype

DNA sequence :
ATGGATATCTCGCGCCAAGCGTTATTCGGCCGGCTCAATCTCACGCTGTTCAAGGCAATCGAAAGTGCGACGGCGTTTTG
CAAGCTTCGCGGCAACCCTTACGTGGAGCTTGTGCATTGGCTCCACCAGCTGCTGCAGGCCCCGGATGGCGACCTGCAGC
GGATGCTGCGCCATGCCGGCGCCGACCTGTCCGTGCTGGACGCCGACCTGACCCGCGCACTGGCCGCGTTGCCTGCCGGC
GCCACCTCGATCAGCGACTTCTCGTTCCAGCTCGAGTCGGCGATCGAGCGGGCCTGGGTCTATGCGACGCTGGCTTTTTC
CGATGACCGCGTCCGCGGCGCCTACCTGCTCGCTGCGCTGCTGAAGACACCGGAGTTGCGCCGTACGGTGCTGGGCATCT
CAAGCCAGTTCGCGAAACTGCGGCCCGATGACCTGGTGGAAATGGCACCGGCGCTCATCGCGCAATCGCCCGAAAGCCGT
GAAGCGGCCTATGACGGCAGCGGCCTGGTACCCGCCACACCGGGTGAAGCCAGTGGCGCGATGGCATCTGCCAGTGCCGG
CAAGTCTGCCCTCGGCAGGTACTGTCGCGACCTGACCGAGGCGGCGCGCGCGGGCCGGCTGGATCCGGTGATCGGCCGTG
AGCATGAGATCCGCACCATGACGGACATCCTGCTGCGCCGCCGTCAGAACAACCCGCTTCTGACCGGCGAAGCAGGTGTC
GGCAAGACCGCCGTCATCGAGGGGCTGGCACTGGCCGTTGCCGCGGGTGAGGTGCCACCCAGCCTGAAGGACGTCAGGCT
GCTGAGCCTCGACGTGGGTGCGCTGCTGGCGGGCGCCAGCATGAAGGGCGAGTTCGAGGCGCGCTTGAAGGGCGTGCTCG
AGGAAGCAGCCAAATCCCCGGCGCCCGTGATCCTGTTCGTCGATGAAGTCCACACGCTGGTTGGCGCCGGTGGCCAGGCC
GGCACCGGCGATGCCGCCAACCTGCTCAAACCGGCGCTGGCGCGTGGGGTACTGCGCACGATCGGCGCCACCACCTGGAG
CGAATACAAGCGCCACATCGAGAAGGACCCGGCGCTTACCCGCCGCTTCCAGGTCCTGCAGGTCATGGAACCGGACGAAG
CCAGGGCGGTCGCCATGGTGCGGGGTCTGGTCCGGACGTTCGAGGCGCATCACGGGGTACTGATCCGCGACGAGGCGGTG
CGCGCCGCCGTCAGGCTGTCGCATCGCTTTATCCCGTCGCGGCAGTTGCCCGACAAGGCGATCAGCCTGCTTGACACCGC
CTGTGCACGCGTCGGCCTGTCATTGCACGCACCGCCGGCAGAAGTCGAACATCTGCGCCATGAACTCGCCGCGGCCGACG
CCGAATCCACGCTATTGGCGCGCGAATCCGGCCTGGGCCGGCCGGACGCTGCGCGTATCGGGCTGGCGCGAGCCCGGCGG
GAACAGCTCGAAGCCGACCTGGCTTTGGCCACGGCGCGATGGGAGCGGGTGCGCGGTCTGGCGAACGACCTGGTCACCCG
CCGGCACGCACTGGTGCAGTCCGCGCCGGATGCATCGCCGCTCGCGGCACCGGCGCAACGAATCCTGGCTGAGCTCGAGG
GCCAGCTTCATGCCGCGCAAGCGGATGCGCCGCTTGTGTACACGGAAGTGGATGAACGCGTGGTCGCCGCCATCGTCGCC
GACTGGACGGGTATCCCCGTTGGGCGCATGGTCGCGGACGAGGTGACGACCGTGATGCAGTTGCCGCAGATACTTGGCGA
ACGCGTGATCGGGCAAGGCCATGCGCTGAGCCAGATCGGGGAGCGCGTTACGACCGCTCGCGCACAACTGGCCGACCCCG
GCAAGCCCGTCGGGGTCTTCCTGCTGGCAGGCCCGTCGGGAGTTGGCAAGACCGAAACGGCGCTGGCGTTGGCCGACGCC
CTCTACGGCGGTGAGCAGAACCTCATCGCCATCAACCTCTCGGAATTCCAGGAGCCGCACACCGTCTCGACGCTCAAGGG
CGCGCCCCCGGGTTATGTCGGCTACGGCGAAGGGGGCGTACTGACCGAAGCGGTGCGCCGCCGGCCCTACAGCGTCGTGT
TGCTCGACGAGGTCGAGAAGGCTCATGCCGATATCCACGAAGTCTTCTACCAGGTCTTCGACAAGGGCTACATGGAGGAT
GGCGAGGGGCGCCATATCGACTTCAGAAACACCATCCTGCTGCTTACCACCAATGCCGGTTCCGAACTGCTGGCGCACCT
CTGTGAAGACCCGGCGCTGATGCCTGAGCCAGCCGCGCTGCGCGACGCACTGATGCCCGAGCTGCGCAAGGTGTTCCCGG
CGGCGTTCCTTGGGCGGCTGGTAGTCGTGCCATATCTGCCGCTGACGGCCGACAACCTCGGCCGCATCGTGCGCCTGCAT
CTCGATCGCGTGGTGGCGCGCATGCAGCATCAGCACGGCATTGTGCTGACTTACGACGAACCGGTAGTCGAGTTCATCGT
GGCGCGCTGCCCGGTCGGCGAGACCGGCGCCCGGCAGCTGATCGGCTTCATTGAGCAGGTCATCCAGCCGCAACTGGCGC
GCCTGTGGCTGTTGGCCCTGTCCGAGAAGCGCGAGCTCGCGGCCATCGGGATCCGCGTTGCCGACCGCGCGCCTGCCGGG
CTTGCCTACCACACCGAATACCGCGCTGGCCTTGATGCCGTTGTGCCGGAGTGTCCCGAGGCCCGGATCGGCTTGATGCC
GACCGGCATGTCCATGTAA

Protein sequence :
MDISRQALFGRLNLTLFKAIESATAFCKLRGNPYVELVHWLHQLLQAPDGDLQRMLRHAGADLSVLDADLTRALAALPAG
ATSISDFSFQLESAIERAWVYATLAFSDDRVRGAYLLAALLKTPELRRTVLGISSQFAKLRPDDLVEMAPALIAQSPESR
EAAYDGSGLVPATPGEASGAMASASAGKSALGRYCRDLTEAARAGRLDPVIGREHEIRTMTDILLRRRQNNPLLTGEAGV
GKTAVIEGLALAVAAGEVPPSLKDVRLLSLDVGALLAGASMKGEFEARLKGVLEEAAKSPAPVILFVDEVHTLVGAGGQA
GTGDAANLLKPALARGVLRTIGATTWSEYKRHIEKDPALTRRFQVLQVMEPDEARAVAMVRGLVRTFEAHHGVLIRDEAV
RAAVRLSHRFIPSRQLPDKAISLLDTACARVGLSLHAPPAEVEHLRHELAAADAESTLLARESGLGRPDAARIGLARARR
EQLEADLALATARWERVRGLANDLVTRRHALVQSAPDASPLAAPAQRILAELEGQLHAAQADAPLVYTEVDERVVAAIVA
DWTGIPVGRMVADEVTTVMQLPQILGERVIGQGHALSQIGERVTTARAQLADPGKPVGVFLLAGPSGVGKTETALALADA
LYGGEQNLIAINLSEFQEPHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHADIHEVFYQVFDKGYMED
GEGRHIDFRNTILLLTTNAGSELLAHLCEDPALMPEPAALRDALMPELRKVFPAAFLGRLVVVPYLPLTADNLGRIVRLH
LDRVVARMQHQHGIVLTYDEPVVEFIVARCPVGETGARQLIGFIEQVIQPQLARLWLLALSEKRELAAIGIRVADRAPAG
LAYHTEYRAGLDAVVPECPEARIGLMPTGMSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sciG YP_002004659.1 replication/virulence associated protein; ATP-dependent protease clpa/b chaperone motif VFG2076 Protein 0.0 56
sciG YP_002004659.1 replication/virulence associated protein; ATP-dependent protease clpa/b chaperone motif VFG2084 Protein 3e-136 43