Gene Information

Name : sciH (RALTA_A0608)
Accession : YP_002004660.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Virulence
Product : replication/virulence associated protein; duf770
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 629117 - 629650 bp
Length : 534 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12437215; Product type ph : phenotype

DNA sequence :

ATGTCTGTTGTGAACAGTTCGCAGAAATTCATCGCGCGCAATCGCGCGCCGCGCGTGCAGATCGAGTACGACGTCGAAGT
CTATGGCTCGGAGAAACGTATCGAGCTGCCCTTCGTGATGGGCGTGCTGGCCGACTTGTCGGGCAAGCCGGCCGAGCCGC
TGCCGGCGGTGGCCGATCGCAAGTTCCTCGAGATCGATATCGACAACTTCGACGAGCGCATGAAGGCCATGAAGCCGCGC
GTGGCGTTTGCGGTGCCCAATACGCTCTCCGGCGACGGCCAACTCATGGTCGACATGACATTCGAGAGCATCGAAGATTT
CTCCCCCGCGGCGGTAGCCGGAAAGGTCGATGCACTCAGGCAACTGCTCGAAGCCCGCACCCAGCTCGCCAACCTGCAGA
CCTACATGGATGGCAAGTCGGGCGCCGAGTCGCTGATCAACCAGTTGCTGCAGGATCCCGCGCTGCTGCAGTCGCTTGCC
AAGGCGCCAAAGCCCGGGGTAGGTGACGACGAACCTCAATCGCCGCAGTCCTGA

Protein sequence :

MSVVNSSQKFIARNRAPRVQIEYDVEVYGSEKRIELPFVMGVLADLSGKPAEPLPAVADRKFLEIDIDNFDERMKAMKPR
VAFAVPNTLSGDGQLMVDMTFESIEDFSPAAVAGKVDALRQLLEARTQLANLQTYMDGKSGAESLINQLLQDPALLQSLA
KAPKPGVGDDEPQSPQS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-64	76

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sciH	YP_002004660.1	replication/virulence associated protein; duf770	VFG2069	Protein	3e-60	75