Gene Information

Name : sciI (RALTA_A0609)
Accession : YP_002004661.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Virulence
Product : replication/virulence associated protein; duf877
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 629700 - 631193 bp
Length : 1494 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12437215; Product type ph : phenotype

DNA sequence :
ATGGCCTCCGTCCAACAAGCACAACAGCAAGCGCTCGCGAGCGCTGACCATTCCGACTTCGCCGCGCTGATCAGCCGCGA
ATTCTCGCCCAAGACCGACCAGGCGCGCGAGGCCGTCGACCTCGCCGTCAAGACCCTGGCCGAGCAGGCGCTCGCCAGCT
CGTTCACCATCAGCGATGATGCCTACAAGAGCATCGAAGCCATCATCGGCGCCATCGACAAAAAGCTGTCCGAGCAGATC
AACCTGATCCTGCACCATGAGGACTTCCAGAAGCTGGAGTCTGCCTGGCGCGGCCTGCACCACCTGGTCTCGAACACCGA
AACCGACGACAAGCTGCGCATCCGCATGATGGACGTGTCAAAGGAAGACCTGCGCCGGACCCTGCGCCGCTACAAGGGCA
TCGGCTGGGACCAGAGCCCGTTCTTCAAGCGCATCTATGAAGAAGAGTACGGCCAGCTTGGTGGCGAGCCATACGGCTGC
CTGGTGGCCGACTACTACTTCGACCACACGCCGCCCGACGTCGAACTCCTTGGCTCGCTGGCCAAGATCTCGGCGGCGGC
TCATGCCCCGTTCATTGCCGGCGCCTCGCCGTCTGTGCTGCAGATGGATTCGTGGCAGGAGCTGGCCAATCCGCGCGACC
TGTCCAAGATATTCCAGAACCTGGAATATGCGCCGTGGAACAGCCTGCGCAACTCGGAAGACGCCCGCTATGTCGGCCTC
GCCATGCCGCGTTTCCTGTCGCGTCTTCCCTACGGCATCAAGACCAATCCGGTCGATGAATTCGACTTCGAAGAAGACAC
CGACGGTGCGGATCACCGCAAGTACGTTTGGAGCAATGCCGCGTACGCCATGGCGGTCAACATCAACCGCTCTTTCAAGC
TCTATGGCTGGTGCACGCTGATCCGAGGCGTCGAAAGCGGCGGCGTGGTCGAGAACCTGCCGTGCCATACCTTCCCCACC
GACGATGGTGGCATCGACATAAAGTGCCCGACCGAAATCGCCATCTCGGACCGCCGTGAAGCCGAACTGTCGAAGAACGG
CTTTATCTCGCTGGTGCACCGCAAGAACACCGACTACGCAGCGTTCATCGGTGCCCAGTCGATGCAGAAGCCAGCCGAGT
ACTACGACGCCGATGCGACCGCCAACGCCAACCTGTCGGCACGCCTGCCGTATCTGTTCGCCTGCTCTCGCTTTGCCCAT
TACCTGAAGTGCATCGTGCGCGACAAGATCGGTGCCTTCAAGGAGCGCGAGGACATGCAGCGCTGGCTCAACGAATGGAT
CATGAACTACGTCGATGCCGACCCGGCCAACTCGTCGCAGGAGACCAAGGCCCGCCGACCGCTGGCGGCAGCCGAGGTGG
TCGTCGAGGAAACGGAAGGCAACCCCGGCTACTACAGCGCCAAGTTCTTCCTGCGTCCGCACTTCCAGCTCGAGGGCCTG
ACCGTCTCGCTGCGCCTGGTGGCGCGCCTGCCGTCGGTCAAGGACGCCGCCTGA

Protein sequence :
MASVQQAQQQALASADHSDFAALISREFSPKTDQAREAVDLAVKTLAEQALASSFTISDDAYKSIEAIIGAIDKKLSEQI
NLILHHEDFQKLESAWRGLHHLVSNTETDDKLRIRMMDVSKEDLRRTLRRYKGIGWDQSPFFKRIYEEEYGQLGGEPYGC
LVADYYFDHTPPDVELLGSLAKISAAAHAPFIAGASPSVLQMDSWQELANPRDLSKIFQNLEYAPWNSLRNSEDARYVGL
AMPRFLSRLPYGIKTNPVDEFDFEEDTDGADHRKYVWSNAAYAMAVNINRSFKLYGWCTLIRGVESGGVVENLPCHTFPT
DDGGIDIKCPTEIAISDRREAELSKNGFISLVHRKNTDYAAFIGAQSMQKPAEYYDADATANANLSARLPYLFACSRFAH
YLKCIVRDKIGAFKEREDMQRWLNEWIMNYVDADPANSSQETKARRPLAAAEVVVEETEGNPGYYSAKFFLRPHFQLEGL
TVSLRLVARLPSVKDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-83 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-83 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sciI YP_002004661.1 replication/virulence associated protein; duf877 VFG2070 Protein 0.0 74
sciI YP_002004661.1 replication/virulence associated protein; duf877 VFG2475 Protein 2e-87 44
sciI YP_002004661.1 replication/virulence associated protein; duf877 VFG2093 Protein 3e-87 43