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Name : sciP (RALTA_A0620) Accession : YP_002004672.1 Strain : Genome accession: NC_010528 Putative virulence/resistance : Unknown Product : replication/virulence associated protein; outer membrane protein, ompa family membrane protein Function : - COG functional category : S : Function unknown COG ID : COG3455 EC number : - Position : 642742 - 644019 bp Length : 1278 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12437215, 15972528; Product type ph : phenotype DNA sequence : ATGAGCCAGCCACTTGTGTCGAGTGACCTTCCGCTGGAACAGCAGGCAGCCCCGCATGCCAGAGCGAAAGACCACGCAAG CCCGCGCGCCGCGGCGGGGGCCGTCCATCAGGACGGCGCCCGAAGGGATGTTGAGCATCGGGTTGATGAGATCCGCAGCA AGGCAAATCCGTTGCTCGCCGCGGCTCGGCCGCTATTGCGGGCTCTGGCCGACATGCCGGCCTCGCTGCGACAGGACGAG GTGGCTGCGCTGAAGCGCATCCTGGTGCGGGAAGCGAAGGACTTTCAGTCGCTCTGCGATCGCGCCAATATTCGGCGCGA GCACGTTCTGGCTGCGCAGTACTGCCTGTGCACAGCACTGGATGAAGCGGCCAACGGCATGTCCTGGGGGCGGCATACCT GGGCGACCAATAGCTTGCTGATCCAGCTGCACGGCGAGAACGATGGCGGCGAGAAGGTGTTCCTGTTGTTGGGGAGGTTG CTGACATCCCAGTCGGAGAACATCGATGTGATCGAGGTGATCTATCACATCCTCTCGCTCGGTTTTCTCGGCCGGTATGC CGGCCACGCCGATGGTCACCGGCAACTCGACGCGATCCGGCAACGCCTGCTGCACTTGATCAGCGGAACGCGTGAAAGCG TACCGCGGGACCTGTCACCGCACTGGCGGGGCGCAGACGCGGGGCGGCTGAGGCTGCTGCGTACGGTCCCGGTGTGGGTC ACGGTGTCGGTGCTGGCACTGGCAGTCTTTGGCCTGTTCGCCTGGTACAAGTACCAGCTGTTGTTCCGCACCCACGACCT CGAACAGCAGATCCTCGCCATTGGCAAGGCAACGCCACCGGAGCCGCCCAGGGCGCTGCGCCTCGCCGAGTTGCTGAGGG ACGAGATTGCGCGTGGGGTTGTCAGCGTGCAGGAGGATGCGACGCGCAGCGCCATCACGTTCCGCGGGGATGACATGTTC GGCCGCGGCCGCGCGGACGTCAGCGAGAAGATCCTGCCGTTGCTGGACAAGGTTGCGGCAGAGGTCAGCAAGGTAACCGG CAAGGTGACCGTGATCGGGCACACCGACAACGTTCCCATCAAGACGGCGAAGTATCCCTCGAACCAGGCGCTGTCGGAAG AGCGTGCGGCGACCGTGGCCGAGTACCTGGCCAGCAAGGGCGTCGCAAAGAACCGGCTCGAAGCGATTGGCAAGGGGGAT TCGCAGCCGCTTGCCGATAACAAGGCGCCAGTCGGCCGGGCAAGGAATCGCCGGGTCGAGATCGTTGTCACGCAGTAA Protein sequence : MSQPLVSSDLPLEQQAAPHARAKDHASPRAAAGAVHQDGARRDVEHRVDEIRSKANPLLAAARPLLRALADMPASLRQDE VAALKRILVREAKDFQSLCDRANIRREHVLAAQYCLCTALDEAANGMSWGRHTWATNSLLIQLHGENDGGEKVFLLLGRL LTSQSENIDVIEVIYHILSLGFLGRYAGHADGHRQLDAIRQRLLHLISGTRESVPRDLSPHWRGADAGRLRLLRTVPVWV TVSVLALAVFGLFAWYKYQLLFRTHDLEQQILAIGKATPPEPPRALRLAELLRDEIARGVVSVQEDATRSAITFRGDDMF GRGRADVSEKILPLLDKVAAEVSKVTGKVTVIGHTDNVPIKTAKYPSNQALSEERAATVAEYLASKGVAKNRLEAIGKGD SQPLADNKAPVGRARNRRVEIVVTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0305 | NP_454885.1 | putative membrane protein | Not tested | SPI-6 | Protein | 5e-76 | 52 |
